Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g01659 ATGTCGGACGAGGAGCACCACTTTGAGTCGAAGGCCGACGCCGGAGCTTCCAAAACCTATCCGCAGCAGGCCGGCACCATTCGCAAGAACGGTTACATAGTCATCAAGGGCAGACCTTGCAAGGTTGTGGAGGTCTCCACTTCTAAAACCGGTAAGCATGGTCATGCTAAATGCCACTTTGTTGCAATTGACATCTTCACTGCCAAAAAGTTGGAAGATATTGTTCCTTCTTCGCACAATTGTGATGTACCCCATGTTACCAGAACTGACTATCAGTTGATTGATATCTCTGAGGATGGATTTTTAAGTCTGCTGACGGACAATGGTAGCACCAAGGATGACCTGAGGCTTCCAACCGATGACAACCTCCTGACTCAGATTAAAGATGGATTTTCTGAGGGTAAGGATCTGGTCGTCTCTGTTATGTCTGCGATGGGGGAAGAGCAGATTTGTGCACTCAAAGACATTGGCCCCAAGTAG 480 47.92 MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTAKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFLSLLTDNGSTKDDLRLPTDDNLLTQIKDGFSEGKDLVVSVMSAMGEEQICALKDIGPK 159
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 35180006 35191825 - Bma012390.1 Bma14g01659 95640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g01659 159 Gene3D - 86 158 IPR012340 -
Bma14g01659 159 CDD S1_eIF5A 86 156 - -
Bma14g01659 159 Gene3D - 1 85 IPR014722 -
Bma14g01659 159 SMART eIF_5a_2 85 154 IPR020189 GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905
Bma14g01659 159 PIRSF Transl_init_eIF5A 1 157 IPR001884 GO:0003723|GO:0003746|GO:0043022|GO:0045901
Bma14g01659 159 Pfam Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold 85 154 IPR020189 GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905
Bma14g01659 159 MobiDBLite consensus disorder prediction 1 21 - -
Bma14g01659 159 TIGRFAM eIF_5A: translation elongation factor IF5A 17 153 IPR001884 GO:0003723|GO:0003746|GO:0043022|GO:0045901
Bma14g01659 159 SUPERFAMILY Nucleic acid-binding proteins 86 156 IPR012340 -
Bma14g01659 159 ProSitePatterns Eukaryotic initiation factor 5A hypusine signature. 50 57 IPR019769 GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905
Bma14g01659 159 PANTHER BNAA07G09420D PROTEIN 1 156 - -
Bma14g01659 159 PANTHER TRANSLATION INITIATION FACTOR 5A FAMILY MEMBER 1 156 IPR001884 GO:0003723|GO:0003746|GO:0043022|GO:0045901
Bma14g01659 159 SUPERFAMILY Translation proteins SH3-like domain 15 93 IPR008991 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g01263 Bma-Chr1:17081543 Bma14g01659 Bma-Chr14:35180006 1.72E-101 dispersed
Bma01g02174 Bma-Chr1:78661310 Bma14g01659 Bma-Chr14:35180006 2.47E-111 dispersed
Bma04g00091 Bma-Chr4:759090 Bma14g01659 Bma-Chr14:35180006 1.40E-113 dispersed
Bma06g00163 Bma-Chr6:2092183 Bma14g01659 Bma-Chr14:35180006 7.07E-105 dispersed
Bma06g00164 Bma-Chr6:2095754 Bma14g01659 Bma-Chr14:35180006 7.07E-105 dispersed
Bma14g01659 Bma-Chr14:35180006 Bma15g00140 Bma-Chr15:1486229 5.61E-105 wgd
Bma14g01659 Bma-Chr14:35180006 Bma03g00840 Bma-Chr3:8035180 7.48E-99 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g01659 K03263 K02180 oeu:111388373 316.62