Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bma14g01662 | ATGGACAAGGATTTGAGTAAGGGAGAAAAGCTTTTGAATAATCTTGGGGGCATGTTTTCTAAACCATGGAAGCCAAAGAAGACGAGAGAAATTACGGGCCCTTTAATTACGGCAGATAATAATTCATATGGGACAAGTGAAAATCATAAACAGCAGAGAGAGAAGTTGGGTGTAGCTCCACCACCAAAAGGAGGGAAATCATCATCAAGAACACCTCCTCCTGAACCATCAGGTGCTCTGCAGAAAGTCGAGGTTGAGAAGGCAAAGCAAGATGATGCACTTTCAGATTTAAGTAACATCTTGGGTGATCTCAAGAACATGGCTGTTGACATGGGAAGTGAGCTTGACAGGCAAAACAAAGCTCTCGACCATCTAGGTAACGATGTGGACGAGCTGAATTCTCGTGTGAAAGGCGCTAATCAACGAACACGGCGCTTGCTCGGGAAGTGA | 450 | 44.67 | MDKDLSKGEKLLNNLGGMFSKPWKPKKTREITGPLITADNNSYGTSENHKQQREKLGVAPPPKGGKSSSRTPPPEPSGALQKVEVEKAKQDDALSDLSNILGDLKNMAVDMGSELDRQNKALDHLGNDVDELNSRVKGANQRTRRLLGK | 149 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 14 | 35239843 | 35241111 | - | Bma012393.1 | Bma14g01662 | 95643 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bma14g01662 | 149 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 84 | 146 | IPR000727 | - | |
| Bma14g01662 | 149 | Coils | Coil | 115 | 142 | - | - | |
| Bma14g01662 | 149 | MobiDBLite | consensus disorder prediction | 1 | 79 | - | - | |
| Bma14g01662 | 149 | SMART | tSNARE_6 | 79 | 146 | IPR000727 | - | |
| Bma14g01662 | 149 | PANTHER | SYNAPTOSOMAL ASSOCIATED PROTEIN | 1 | 149 | - | - | |
| Bma14g01662 | 149 | SUPERFAMILY | SNARE fusion complex | 81 | 147 | - | - | |
| Bma14g01662 | 149 | CDD | SNARE_Qc | 87 | 145 | - | - | |
| Bma14g01662 | 149 | Gene3D | - | 81 | 148 | - | - | |
| Bma14g01662 | 149 | PANTHER | SNAP25 HOMOLOGOUS PROTEIN SNAP30-RELATED | 1 | 149 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bma14g01662 | Bma-Chr14:35239843 | Bma03g00844 | Bma-Chr3:8082838 | 1.92E-40 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bma14g01662 | K18211 | - | jre:108984872 | 241.121 |