Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g01665 ATGTGGAGGAAAAGCCTCGATTTGGTTTCGCAGAGATATTTCTCTTCCGCCCATGAAATCCCCAGCCTTTACTCTTTTCTTCAATCCTCCATTTTTGCGGTAAAGAGAACTCCACTACCTTCTGCTGACTCCATTAACCTCAGTAAGGATTCAACCCCTCAAACCCTATCCCCAGAACGTATCACCGCCTTAGAGATTACTCTTCAGAAATCCCTCGTCACGAACGAAACAGACGAGGCATGGAAATCCTTTAAGATCCTCACGGGTAGTTCTTCTTTTCCGAGTAAGTTCCTTACAAATTCCCTCGTTACCTATTTATCCTCGATAGGAGACACTCACAATTTGAAAAGGGCTTTTGCCACTGTGGTATATGCGGTGGAAAAAAAACCTGAGTTGATAGAATTTAAAACTATTGAGACTCTGCTGAATTCTATGAAATGTGCTAAGACTGTCGCCCCTGCGATTTGTTTGATTAAATGCATGTTCAAGAATAGGTACTTTGTTCCTTTTAGTGTTTGGGGAAAGGTTCTTGTTGAAATATGCAAAGAGAATGGTTCCTTTATTGCCTTTTTACGAGTTTTTGAAGAAAATTGTAGAATTGCTTTGGAAGAGAAGTTGGATCATATGAAACCGGACCTGGCTGGTTGTAATGCAGCATTAGAGGGGTGTTGTCGTGAGCTTGTATCTATTAATGACGCGGAGAATATTGTTGAGAAAATGGCGATTTTCGCAGTTAGGCCTGATGAATCTAGTTTTGGTGCTCTGGCTTATTTGTATGCATCAAAGGGGCTCAAGAAAAAAATAGTTGAATTAGAAGATTTGATGAATGGACTTAATTTATCAAATAGGAGGCTGTTTAAGAGTGATTTAATTAGTGGATATCTAAAGTCGGGCAAGTTAGATTCTGTGTCAGCAACTATTTTGTGTGGTTTAAGAGAAGGAAGGGAAGAAGATTCCCAATTTGAGGAGGAAACATACTGTGAAATTGTCAAGGGTTTTCTTCAAAATGGAAATATCAAGGGTTTGGCTGCCTTAGTTATTGAAGCACAAAAGCTAGAGCCTTCAACAATGGCAAATAATAAATCTATTGGATATGGGATCATTAATGCGTGTGTTAGCATTGGCGTTACAGATAAGGCTCATTTTATTCTAGATGAAATTAGCGCTCAAGGAAGTTCTCTAACACTTGGTGTCTATTTGCCAATCTTGAATGCTTACTGCAAAGATCAACGAACAGCTGAAGCTACTCAACTGGTGATGAATATTAGCATCTCTGGGCTTGAGCTCGACGCAGCTAGCTATGACTCTCTAATAGAAGCCTCAATGTCAAACCAAGACTTCCAGTCTGCTTTTTCTTTGTTCAGGGACATGAGAGAAACAAGACAACCTGATTTGAAAGGAAGTTACTTAACTATTATGACTGGCTTCATGGAGAATCAACGTCCTGAGTTAATGGCAGCATTTTTAGACGAGGTCGTTGAAGACCCTCGTGTTGAAGTTGGAACCCACGATTGGAACTCTATAATTCACGCTTTTTGTAAAGCTGGGCGGCTTGAAGGTGCAAGGAGGACTTTTAGAAGGATGATATTTTTGCAGTATGAACCAAATGACCAGACATATTTGTCTCTAATTAACGGTTATGTATCTGCGGAGAAATATTTTAGTGTTTTGATCTTGTGGAATGAAGTTAAGAGAAAGATTTCGACAGAGAGTGGTAAAGGGATTCAATTTGATCAAAACTTGGTTGATGCGTTCCTCTTTGGCCTGGTCAAGGGAGGTTTCTTTGATGCTGTGATGCAAGTTATCGAGAAATCTCAGGAGATGAAAATCTTTGTCGATAAGTGGAAGTACAAGCAAGCATATATGGAGACCCATAAAAGGTTAAAAATTGGGAAAATGAGGAAAAGGAGTTCCAGGAAAATGGAAGCTTTAATTTCTTTCAAGAACTGGGCTGGTCTGAATAGTTGA 1968 39.58 MWRKSLDLVSQRYFSSAHEIPSLYSFLQSSIFAVKRTPLPSADSINLSKDSTPQTLSPERITALEITLQKSLVTNETDEAWKSFKILTGSSSFPSKFLTNSLVTYLSSIGDTHNLKRAFATVVYAVEKKPELIEFKTIETLLNSMKCAKTVAPAICLIKCMFKNRYFVPFSVWGKVLVEICKENGSFIAFLRVFEENCRIALEEKLDHMKPDLAGCNAALEGCCRELVSINDAENIVEKMAIFAVRPDESSFGALAYLYASKGLKKKIVELEDLMNGLNLSNRRLFKSDLISGYLKSGKLDSVSATILCGLREGREEDSQFEEETYCEIVKGFLQNGNIKGLAALVIEAQKLEPSTMANNKSIGYGIINACVSIGVTDKAHFILDEISAQGSSLTLGVYLPILNAYCKDQRTAEATQLVMNISISGLELDAASYDSLIEASMSNQDFQSAFSLFRDMRETRQPDLKGSYLTIMTGFMENQRPELMAAFLDEVVEDPRVEVGTHDWNSIIHAFCKAGRLEGARRTFRRMIFLQYEPNDQTYLSLINGYVSAEKYFSVLILWNEVKRKISTESGKGIQFDQNLVDAFLFGLVKGGFFDAVMQVIEKSQEMKIFVDKWKYKQAYMETHKRLKIGKMRKRSSRKMEALISFKNWAGLNS 655
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 35306120 35308087 + Bma012398.1 Bma14g01665 95646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g01665 655 Gene3D Tetratricopeptide repeat domain 358 465 IPR011990 GO:0005515
Bma14g01665 655 TIGRFAM PPR: pentatricopeptide repeat domain 505 536 IPR002885 -
Bma14g01665 655 Pfam Pentatricopeptide repeat domain 418 461 IPR002885 -
Bma14g01665 655 PANTHER OS01G0788900 PROTEIN 1 654 - -
Bma14g01665 655 PANTHER BNAC05G43320D PROTEIN 1 654 - -
Bma14g01665 655 Gene3D Tetratricopeptide repeat domain 466 653 IPR011990 GO:0005515
Bma14g01665 655 Gene3D Tetratricopeptide repeat domain 55 357 IPR011990 GO:0005515
Bma14g01665 655 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 501 535 IPR002885 -
Bma14g01665 655 Pfam PPR repeat family 505 548 IPR002885 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma10g00019 Bma-Chr10:304683 Bma14g01665 Bma-Chr14:35306120 2.32E-46 dispersed
Bma10g00520 Bma-Chr10:6031336 Bma14g01665 Bma-Chr14:35306120 2.56E-38 dispersed
Bma14g01665 Bma-Chr14:35306120 Bma08g00913 Bma-Chr8:48080950 4.70E-06 dispersed
Bma14g01665 Bma-Chr14:35306120 Bma01g01929 Bma-Chr1:71231246 2.05E-17 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g01665 - - jre:109014373 936.791