Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bma14g01666 | ATGGGTGAAGGAAACGAAGGAAGAAGAAAGGGGATAGAAAGCTTATCTCTTCAGACAGAAAATTACCCCGGACATCTACTGCAGAGGTTTATTTTCAGTGCTTCGCAGAAATCTGAATTCTGGGACGCTGACGAAGACGAAGAATCTAAGGATGTTGAGCTGAGTCTTGGGCTTTCATTGGGTGGTCGATTTGGAGTCGACAAAAATTCCAAGAAATTGACCCGTTCTTCGTCGATTGCCAGTACGATAACCATGATAAGAGGTGACGAGGCCTTGAATCCGCCGTTGGTGGCCTTTCCGGCGCTTATGAGGACGTCGTCACTTCCGACAGAGACAGAGGAGTGGAGAAAGAGGAAGGAATTGCAATCTTTGAGAAGAATGGAAGCGAAGAGGAGGAGGTCGAAAAAACAGCGGTGCAAGGAGGTTGCAGGTGGGTGTTTTGAGGAGGGCAGGCCGGAAATCGAGGGTCTTACGACGGTGAATTTCTGGGAAAAGAAGGAAATATCACTGGAGGAGGAAAACAAGGAGGGATTGACAGGGCACCAGCATAATCAGGTGGCGGCTGCAGCTAAACAAGCTCTTTTTGGTGGAATTGTGGATGTGGTGAAAAAAGAGAGAGGCAGTTTTCCGGTTGGATATGGTGGCGGAGAAAGAGGGGGTCGACCCGTTTCGCAAGGATCCGCAGAGTCGCAGGCCGGGAGCTCGTCGGGGATGTCGGAATTGGAGAGCAAACCTCTTCATGCAGGATCAAGCAGCTATGGGGAAGCAAGAATCTCGTCAAGCAATTCAATGCTGCGGGAACAAGGGGACGAGGAAGCTGGAGGAGGGTCTTCAAAGACAAAGGAAAATACAAGCGAAACTTGGAAAGAAAGGACAAAAAACTCGGCGTATAAGCCAGATGCTGTAAGTAGTGGAGGGGGAGGGAGAGGGAATTCAGTGGAAGACATGCCGTGCGTATTCACGGTGGGAGACAGGCCGAACGGAAGAAGAGTGGAAGGAATTCTGTACAAATATGGAAAGGGTGAGGAGGTGAGGATAATGTGTGTTTGCCATGGTGCTTTTCTTTCACCAGCGGAGTTTGTGAAACATGCTGGTGGTGGAGATGTGGCTCACCCACTTAGGCATATTGTTGTTAACCCTAATTCCTCTTTATTTTTGTAA | 1161 | 49.01 | MGEGNEGRRKGIESLSLQTENYPGHLLQRFIFSASQKSEFWDADEDEESKDVELSLGLSLGGRFGVDKNSKKLTRSSSIASTITMIRGDEALNPPLVAFPALMRTSSLPTETEEWRKRKELQSLRRMEAKRRRSKKQRCKEVAGGCFEEGRPEIEGLTTVNFWEKKEISLEEENKEGLTGHQHNQVAAAAKQALFGGIVDVVKKERGSFPVGYGGGERGGRPVSQGSAESQAGSSSGMSELESKPLHAGSSSYGEARISSSNSMLREQGDEEAGGGSSKTKENTSETWKERTKNSAYKPDAVSSGGGGRGNSVEDMPCVFTVGDRPNGRRVEGILYKYGKGEEVRIMCVCHGAFLSPAEFVKHAGGGDVAHPLRHIVVNPNSSLFL | 386 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 14 | 35326287 | 35330502 | - | Bma012399.1 | Bma14g01666 | 95647 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bma14g01666 | 386 | MobiDBLite | consensus disorder prediction | 272 | 296 | - | - | |
| Bma14g01666 | 386 | Pfam | Putative nuclear localisation signal | 102 | 243 | IPR032310 | - | |
| Bma14g01666 | 386 | Pfam | Ethylene-responsive binding factor-associated repression | 47 | 81 | IPR012463 | - | |
| Bma14g01666 | 386 | Pfam | Tify domain binding domain | 344 | 379 | IPR032308 | - | |
| Bma14g01666 | 386 | PANTHER | AFP HOMOLOG 2 | 20 | 383 | IPR031307 | GO:0007165 | |
| Bma14g01666 | 386 | PANTHER | NINJA-FAMILY PROTEIN AFP1 | 20 | 383 | - | - | |
| Bma14g01666 | 386 | MobiDBLite | consensus disorder prediction | 253 | 267 | - | - | |
| Bma14g01666 | 386 | MobiDBLite | consensus disorder prediction | 209 | 314 | - | - | |
| Bma14g01666 | 386 | MobiDBLite | consensus disorder prediction | 224 | 241 | - | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Bma14g01666 | Bma15g00131 | BCT |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bma01g00197 | Bma-Chr1:1728974 | Bma14g01666 | Bma-Chr14:35326287 | 6.48E-07 | transposed | |
| Bma14g01465 | Bma-Chr14:28686141 | Bma14g01666 | Bma-Chr14:35326287 | 2.12E-60 | transposed | |
| Bma14g01666 | Bma-Chr14:35326287 | Bma15g00131 | Bma-Chr15:1429254 | 4.40E-67 | wgd | |
| Bma14g01666 | Bma-Chr14:35326287 | Bma03g00853 | Bma-Chr3:8203391 | 9.51E-25 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bma14g01666 | - | - | csv:101220339 | 389.423 |