Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g01669 ATGTCCGATACCAATGACCCTGATCTCGCCGAGTATCTCGCCCGAGAAAACTCGTACGCTGATGCTTTTATGGTGGACACTAAGAATCTGCAACGCGCTATGTTTTCGGAGATGGCCAGTCGAATCCCGGCTCAAATTTCCACTCCTCCTGAGCGTTGGGGACCTTGGTTGTACTACCAATACATTCCAGAGGGAAAGGAATACCCAGTTCTTTGTAGAATGTTAGAAACAAAGGATAGCGGTTGGCTAAAGAGTTATGTTCATGTTGGTACATGTCGAGTTTCACCAGATCACCACTTTTTAGCATATACGGTTGATATAACTGGCAGTGAACATTTCATGCTTCAAATTAAAGACCTGAGAAGTGGATTTGTTATCCAAAAATCTCAGATAGAAAGGGTTGTTTATATAATAGATTCTTCCAACCCGCTTGGTGGTTTGCAAAGAATTAACAAACGCGTTCCAGGTGTTCAATACTTTCTAGAACATCATAACGGTCTTTTCTACATTTTAACCAATGCTCCTTTGGGAAAGTTGAATTGGCATTCTGGAGAAGGTTATTATCTTGCTAGATGTCGAGTTGAAGATATATCGACAGCAGATTGGCAGGATATCATCCTTCCAAGTGAACATCTCAGTTTTCAGGATTTGGACATTTTCAATGGACATTTGGTGCTTTTCGTTAATAAGAACAATGTGCCTATGCTATGCTCCATTAATTTGCCTTTAAATATTAGTTATAAGAGTCAAATAGAAATTCAGAATCTTAATCCATGGTACTTCCCTCTACCCCCAAGTTCTTGTAGCGTTGTTCCGAGTTCCAACCATGACTTCATGGGTTCATTATATCGAGTAGTGCTGTCTTCTCCAGTGATGCCTGATGTCGTCGTCGATTATGACATGTCTAGACAAACGTTCTCAGTTGTTCAGCAGGAGGAAGTTATGGGCGCCTTTCCTAATAAAAAATATTCATTAAGTCATAATGATAATGAACAAGTTCAGTTGGAGTCTCAAATGTGGAACTCTCTTTCTAATGCATATTGTTGTGAGAGAAAGGACGTTGTATCACGAGATGGGACGAAAATTCCTTTGACCTTGTTGTATTCTCGACTATCTTGGCAGAAAGCCCAATCTCCGGGTCTTTTACAAGGATATGGAGCATATGGAGAAGTTTTAGATAAGAGCTGGTGTTCCCATCGCCTTAGCTTACTTGATCGAGGATTTTTAGTACCCTTTCTTGATATATGCAACACATTGTCAGATCCTAGTTTACCCCTCACTGTCCTGGATTACGAAGAGTTTGGAAATCCAATGATTCAGAATCAGTTTGAGTATATTCTAAGTTATTCTCCTTATGATAACATTTCTCCCGCCAAGTGTTACCCTCCAATGCTCGTGCAAGCTTCATTTCTGGACTCCAGGGGAGTTTGGGAAGCTGCCAAATGGGTTGCCAAAATACGGGACGAGACGTGCTCTAGATGTTCTCGATCAACTATTTTGAAGACAAACATGGTCGGAGGACACTTTGGTGAAGGTGGACGACACGGTCAATGCGAAGAAATGGCATATGATTATGCGTTTATAATAAAAGCAATGGGGATATCCGAGGAAAACTACGAGCAAAATCGGCCTCGAGATGTTTTATAA 1647 40.98 MSDTNDPDLAEYLARENSYADAFMVDTKNLQRAMFSEMASRIPAQISTPPERWGPWLYYQYIPEGKEYPVLCRMLETKDSGWLKSYVHVGTCRVSPDHHFLAYTVDITGSEHFMLQIKDLRSGFVIQKSQIERVVYIIDSSNPLGGLQRINKRVPGVQYFLEHHNGLFYILTNAPLGKLNWHSGEGYYLARCRVEDISTADWQDIILPSEHLSFQDLDIFNGHLVLFVNKNNVPMLCSINLPLNISYKSQIEIQNLNPWYFPLPPSSCSVVPSSNHDFMGSLYRVVLSSPVMPDVVVDYDMSRQTFSVVQQEEVMGAFPNKKYSLSHNDNEQVQLESQMWNSLSNAYCCERKDVVSRDGTKIPLTLLYSRLSWQKAQSPGLLQGYGAYGEVLDKSWCSHRLSLLDRGFLVPFLDICNTLSDPSLPLTVLDYEEFGNPMIQNQFEYILSYSPYDNISPAKCYPPMLVQASFLDSRGVWEAAKWVAKIRDETCSRCSRSTILKTNMVGGHFGEGGRHGQCEEMAYDYAFIIKAMGISEENYEQNRPRDVL 548
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 35387756 35394263 - Bma012403.1 Bma14g01669 95650

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g01669 548 PANTHER PROLYL OLIGOPEPTIDASE FAMILY PROTEIN 410 537 - -
Bma14g01669 548 PANTHER PROTEASE FAMILY S9A OLIGOPEPTIDASE 410 537 - -
Bma14g01669 548 PANTHER PROTEASE FAMILY S9A OLIGOPEPTIDASE 1 135 - -
Bma14g01669 548 SUPERFAMILY Peptidase/esterase 'gauge' domain 1 127 - -
Bma14g01669 548 PANTHER PROTEASE FAMILY S9A OLIGOPEPTIDASE 135 410 - -
Bma14g01669 548 SUPERFAMILY Peptidase/esterase 'gauge' domain 135 316 - -
Bma14g01669 548 PANTHER PROLYL OLIGOPEPTIDASE FAMILY PROTEIN 135 410 - -
Bma14g01669 548 Gene3D alpha/beta hydrolase 3 44 IPR029058 -
Bma14g01669 548 Pfam Prolyl oligopeptidase family 410 533 IPR001375 GO:0006508|GO:0008236
Bma14g01669 548 Gene3D alpha/beta hydrolase 314 409 IPR029058 -
Bma14g01669 548 Gene3D - 152 313 - -
Bma14g01669 548 Pfam Prolyl oligopeptidase, N-terminal beta-propeller domain 2 123 IPR023302 GO:0004252
Bma14g01669 548 Pfam Prolyl oligopeptidase, N-terminal beta-propeller domain 131 311 IPR023302 GO:0004252
Bma14g01669 548 Gene3D alpha/beta hydrolase 410 528 IPR029058 -
Bma14g01669 548 Gene3D - 45 123 - -
Bma14g01669 548 PANTHER PROLYL OLIGOPEPTIDASE FAMILY PROTEIN 1 135 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g01669 - - - adu:107489614 467.618
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g01090 Bma-Chr3:13668130 Bma14g01669 Bma-Chr14:35387756 1.79E-20 dispersed
Bma14g01669 Bma-Chr14:35387756 Bma08g00838 Bma-Chr8:46251389 4.66E-23 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g992 . . . . . . Bma14g01669 . Cmo04g01649 . . . Car04g01626 . . . Cpe01g01398 Bhi07g01448 . . . . . . . . . . . . . . . . . . Csa05g02531 Chy10g01075 Cme10g01398 . Blo11g00797 Bda07g01492 . Bpe11g01659 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007009 2 3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 2 1 1 3 1 1 37
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bma14g01669 Bma_Chr14 FPKM 2.996341 3.514868 3.536036 2.636286 1.97614 2.184026 1.744768 0.489218 0.537899 0.650699