Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g01678 ATGACGAAATCCAAAACTGAGGACAGAGCAGGAGAGGAAGTGAAACCAGATGGCCTGGAAATCGCCTCCATCGGAGCGCTTTATAGTGGACCTTGGGATAAGAAGTATTGGAGCTGCACTAGGGGTAAAGATCGTCATCCTTATCCTATTGGGTACCAAGCTTTACGAGCTCATAATGGGAGCATTTATAAGATGGAAATCCATGAAGGTTCTAAAGGTCCATTATTCGCGGTTTCTTCTGCTGATGGATATTATTGTTCTGGGCAAACTCCTGATATTGCATGGGAAAAGTTTCAAAAGAAAGGTTGTGTACGCATGAATATTTTGCATGGGAAGCGTTTTTCAAGCAAAATTGATGGTGTGGAGTTTTTTGGGTTCAAAAATCCATTTGTTCAGAGGTTACTTCGCGAACTGGTTGCAAATGTGAATGGAGCTAATGATTCGAATTCATTATCCTCAACTTTATGTTCTGAGTCTTCTGGAAAAGAAAACACATCGGTTGATCATGTGTGTCGTGATGGATGTTCATACCCCGATTTACTTACTTTTGTGACAAGACCTCAGATTACAGGGAAGAGAAGTAAGAGACATACAAGCAATTCAGAGCAAGCCAATGGTGACAACTTCAAAAGATCTCGAAAGCTATGTCCAATACAAACTTTGAAGGCATCAAAATATGTTCTTTTAGATAAGAGTAATCAAATTAAAGAGAGTTCCATGCTTGCTCTTCCAAAAGATAACGTTGAGGAAGCTGTGCCTGATCAAGATGTGAAGCATATTTGCTCTTCTGAATGCAGTAAAGTTGCTGTGGTTGATGAAAAGCAGACCTCAGAGGAAAAACCTCCTGATAGGTCACATGTCAACGTTATGGAAAAGTTCAATTTGACAATGGGGACAGGTAATGCAAGGCCTTCATTCATGAAACACTGTCCAGAGTCTCCAGATGTTTGTGGCCATTCTCTTTATGCGCCTGTTACCACTGATCTAGTCCAAGATATTTCTGGTTTTACTCCAGTCGTCATGGATAAAAATAATCACTTTCTGGAAGATGAAGTTGCTGCAGCTGATTTGGGTGAGGAAACGGCCAAGTCCATGATGACCTTTCTGCTTCCTCAAGCAGTTCCACTTCTCCAGAAGGCCTCAAAGCAAAAAAAGATGATTCTTGCTCGCTTGGAAACTGCACCTTTTGAGGTGGAATCTAAAGGGGAAAAGCTTAGAACTGAAGAATTGGTGGTTCCAACCTTAGATAAAGATACAGATAGAAAGGAAGACCTTCATACTCAAAAGGGAGCTACTTATTTAACTCCAAATATTGAGCTTGCTCAATCTTTAGGTCTCGACAGCCTGGATCAAAATCAATGTACTCATGTCACCCAAAAGGTAATATCATCTTCTGACATTAATGATGCTGTTCAAGATACTCCTATCAAAGAAACAAATTCAGTTAATTCTCAAGGACAACATGTCTCTGTTTACCTGCCTGATAATTCGTTAGTTTCTCATGCTGAGACCCATAGAAAAAACAGGGTGGATAAGAAAGAAACAGACATAAGTTTGGGCGAGTGGCATAATGAGGATAATATGAATGTACCTGTGTATTTTCAAGGCTGCATGAGTACGTCACAAGAATTCTCTTGTGAAAAAACAGACCCCTATAAAGACTTGGTAGGTTGTGAAATTCACTTTGAGGAGAAAAATCTTGATACTGCTCCTGCCCATGTTGAAGGTGTCATCTGTGAATCAAGTTGTTCATCTAAACCTAGTATCAAGGCTTCAAATGCTCCAAATGATAATGATTCTGCAAAGCCACCATATGAGAAATCTGTTCCTAGAGTTGAAGGTGCTGAAACCGGAATGCCTCTTTCTCAAGTCACAAGCAGAGTGTACTGCAGAAAGAAAGTTCAAAATTCTACTCATTCAACAAGAAAGTACAATAAATCACTATTCAAGAGTACAGTGGAAAAGACCTTTGTAGATTCTTTTGCCCTTAAAGATTCTGTTTTCACTGAACCACTTCATAGCTCAGAGGTTTGTTGTGTAAATTTTTTACCTGATGGTCAACAGAAAAATGATTTAGTTCCTACTGAAACCAAGCTTGGAAGCAAAACAAATGGTTTGCTCGGGGAAAATGTTAGTACAACATCTCAGGGTCTTTTAGATAATAAGTGTGCTGCTAAAAGTCATGATCATGAAAGTATGTGCCTCTATCAAGAGGACGATTCTCCAGGATTTTTGTATGCATCTACCTTACTTACTGAAAAATTGGAAGTTTACATTGATGAAGAGGTGGCCAAACACAAGAACATTTCAGAAGGAAAGCATTACGGGCTTTCCAACCAAAATGAGCCAACTCTTGCTGATAAATATACATCTCATGCAGCAGAAGTTGGGATTAATTCAGACAGAAATCCTCACTGCAGTGGTCTTTTAGCTAGTAAGTGTGCTGCTAAAAGTCATGATCAGGAAAGTATGTGTCTCTGTCAAGATGAAGATTCTCCAGGATTTTTGTATGCATCTACCTTACTTACTGAAAAATTGGAAGTGAACATTGAAGAAGATGTGGCAAAACACAAGAACATTTCAGAAGGAAAGCATTACGGGCTTTCCATCCAAAATGAGCCAACTCTTGCTGACAAATTTACATCTCATACAGCAGAAGTTGAGATTAATTCAGATAGATATCCTCACTGTAGTGGTCTTTTAGCTAATAAGTGTGCTGCTAAAAGTCATGATCAGGAAAGTATGTGCCTCCGTCAAGATGAAGATTCTTCAGGATTTTTGTATGAATCTACCTTACTTGCTGAAAAATTGGAAGTGTACATTGATGAAGAGGTGGCCAAACACACGAACATTTCAGGAGGAAAGCGTTACGAGCTTTCCAGGCAAAATGAGCCTACTCTTTCTGACAAATGTACATCTCATACAGAAGAAGTTGGGATTAATTCTGACAGGAATCCTCAGTGCAGTGTGGAGTGTTATCAGGAGCTAGATAGAATGTTTCTCTTGGGATGCTATTCCCTTCCCATGCCTGTTTTATCTTTATGGCTTAGACAAAATGCCAATTCGATATCTATTTGTGTTCTCTGTGGCCATCTGGCAGACAAAAACATGACTCTTTTAGTCTACAATGTTGATATAAGTGAACCAAGGGTGGGATATCCTTGTTTTGTTGGTCATACATCAGTGACATTGCCTATCATTAACGACTATTTGGGCAGAGAAATTGCTTTGGAAACATCTGGTTTTCAGTTGACTCCAAATGGGAATTCTCTTGTTTTGCTGGATGGCATTAGAACACCTTATTGCAGGGAAGGGAAGACTAATTGTTCGTGCTACACATGCACTTCGCATTCCATTGAGGAAAATGCAGTGAAGGTTGTGCAAGTAAAGTTTGGTTATGTCTCTATTGTAGCAAAGTTTAAAGCAGTCAATCATCTGCATGGTATATTGGTTTGCAAACCTAACTATCTTGTTGCTGTTGGAGAGAGTGGAAGGATGCATATATGGGTCATGAATTCAACTTGGAGTGTACAGAATGAAAGCTATGTTTTGCCATCTAATGAGTGCATATCTCCTGGCATAGTGGAGTTGAAGAAAATTCCAATGTTCGCTGATCTAGTTGTTGGTCATAATGGTTTCTGTGAATTTACCATTTGGAATATTTCTAAACGATCATCCATTTCAAAGTTCTCATCTTCAAGAACCTCAATTTATCAGTTCTTTCCGGTTTATTTTAGTTGGAGAAGAAAGGGTCCCACTTTCAATTATGAGGCGGAGGAACATGTCAATGAGATGATGATAGCAACAAACAAAATATTTTCAGAGACCACTGAGAAACTTCATCTCTTTGGAGAAGATATATCCATCTGCCTTTTTGTGTTAACGGCATCAGATTACGATCGAAATCACGACTCAGTTATGGATAGGCAGTGGAAACTAGCACTTCTCACTGACAATATGGTCACTTTTGGAACACCATTTGATTCAAGTGCTTGTGCTATTGGAGCATTCTGCTGGCCAAGGAATTATTGGAACTTGCGACGGACTTGTCTATATGTGGGAGCTGGCGACAGGATCTAA 4080 39.41 MTKSKTEDRAGEEVKPDGLEIASIGALYSGPWDKKYWSCTRGKDRHPYPIGYQALRAHNGSIYKMEIHEGSKGPLFAVSSADGYYCSGQTPDIAWEKFQKKGCVRMNILHGKRFSSKIDGVEFFGFKNPFVQRLLRELVANVNGANDSNSLSSTLCSESSGKENTSVDHVCRDGCSYPDLLTFVTRPQITGKRSKRHTSNSEQANGDNFKRSRKLCPIQTLKASKYVLLDKSNQIKESSMLALPKDNVEEAVPDQDVKHICSSECSKVAVVDEKQTSEEKPPDRSHVNVMEKFNLTMGTGNARPSFMKHCPESPDVCGHSLYAPVTTDLVQDISGFTPVVMDKNNHFLEDEVAAADLGEETAKSMMTFLLPQAVPLLQKASKQKKMILARLETAPFEVESKGEKLRTEELVVPTLDKDTDRKEDLHTQKGATYLTPNIELAQSLGLDSLDQNQCTHVTQKVISSSDINDAVQDTPIKETNSVNSQGQHVSVYLPDNSLVSHAETHRKNRVDKKETDISLGEWHNEDNMNVPVYFQGCMSTSQEFSCEKTDPYKDLVGCEIHFEEKNLDTAPAHVEGVICESSCSSKPSIKASNAPNDNDSAKPPYEKSVPRVEGAETGMPLSQVTSRVYCRKKVQNSTHSTRKYNKSLFKSTVEKTFVDSFALKDSVFTEPLHSSEVCCVNFLPDGQQKNDLVPTETKLGSKTNGLLGENVSTTSQGLLDNKCAAKSHDHESMCLYQEDDSPGFLYASTLLTEKLEVYIDEEVAKHKNISEGKHYGLSNQNEPTLADKYTSHAAEVGINSDRNPHCSGLLASKCAAKSHDQESMCLCQDEDSPGFLYASTLLTEKLEVNIEEDVAKHKNISEGKHYGLSIQNEPTLADKFTSHTAEVEINSDRYPHCSGLLANKCAAKSHDQESMCLRQDEDSSGFLYESTLLAEKLEVYIDEEVAKHTNISGGKRYELSRQNEPTLSDKCTSHTEEVGINSDRNPQCSVECYQELDRMFLLGCYSLPMPVLSLWLRQNANSISICVLCGHLADKNMTLLVYNVDISEPRVGYPCFVGHTSVTLPIINDYLGREIALETSGFQLTPNGNSLVLLDGIRTPYCREGKTNCSCYTCTSHSIEENAVKVVQVKFGYVSIVAKFKAVNHLHGILVCKPNYLVAVGESGRMHIWVMNSTWSVQNESYVLPSNECISPGIVELKKIPMFADLVVGHNGFCEFTIWNISKRSSISKFSSSRTSIYQFFPVYFSWRRKGPTFNYEAEEHVNEMMIATNKIFSETTEKLHLFGEDISICLFVLTASDYDRNHDSVMDRQWKLALLTDNMVTFGTPFDSSACAIGAFCWPRNYWNLRRTCLYVGAGDRI 1359
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 35712974 35721876 + Bma012420.1 Bma14g01678 95659

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g01678 1359 MobiDBLite consensus disorder prediction 584 618 - -
Bma14g01678 1359 PANTHER TRANSFORMING GROWTH FACTOR BETA REGULATED GENE 1 1 1337 IPR040092 -
Bma14g01678 1359 MobiDBLite consensus disorder prediction 188 208 - -
Bma14g01678 1359 MobiDBLite consensus disorder prediction 584 599 - -
Bma14g01678 1359 ProSiteProfiles FYR domain FYRC motif profile. 71 151 IPR003889 GO:0005634
Bma14g01678 1359 ProSiteProfiles FYR domain FYRN motif profile. 11 70 IPR003888 GO:0005634
Bma14g01678 1359 Pfam F/Y rich C-terminus 73 138 IPR003889 GO:0005634
Bma14g01678 1359 Gene3D - 14 142 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g01678 - - - qsu:112029418 372.089
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g13 . . . . . . Bma14g01678 . . . . . . . . . . . . . . . . . . . . . . . . Cone13ag0896 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0008686 0 1 1 1 0 1 1 1 1 1 1 1 1 1 1 2 1 1 2 1 1 1 1 1 1 1 1 1 6 1 35
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bma14g01678 Bma_Chr14 FPKM 32.193424 34.027851 0.563078 0.591745 8.682856 7.172505 9.342624 0.164415 0.071552 0.096924