Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g01697 ATGGATGGAAGTAGCGTTGATGAAAGCACGGCCAGCGAATCCACCTCTATTTCTCCCGTTAGTCCGCTCGCTTTTCCGGTCACAAAGTGTTCTTCGCCGCTGGTGGGTCTGTCAAGAATGGGCAGCGGAACGAGTGTCGTCGTCGACTCCGATCCGTCCACCGGCGTTGAGGCGGAGTCGAGAAAGCTGCCTTCTTCCAGGTTCAAGGGGGTGGTGCCGCAGCCGAATGGGCGGTGGGGGGCGCAGATTTACGAGAAGCACCAGCGAGTCTGGCTCGGCACTTTCAACGAGGAGGACGAGGCAGCCAGAGCCTACGACATCGCCGCCCAACGCTTCCGCGGTCGCGATGCCGTCACTAATTTCAAGCCACTTGCCGACACCACCGACGACGAAATCGAGTCGGCGTTTCTTAGTTCCCATTCGAAATCTGAGATTGTCGATATGCTACGTAAGCATACTTACCGCGATGAGCTGCAGCAGAGCAAACGAAAAAATGGGTTACTCGACGGCTCCGGGAAACGAAGATCCCTCGGGCTAACCGGCACAGGACAGGACCGAGACTCCAAGACCCGTGACCTGCTTTTCGAGAAGGCGGTGACGCCCAGCGACGTCGGAAAACTGAATCGCCTGGTGATCCCGAAACAGCACGCGGAGAAACATTTCCCGTTGCAGAGCGGAACCGCGTCATCCAAAGGCGTGCTTCTCAACCTAGAGGATATCGGAGGAAAAGTTTGGCGATTCCGATATTCCTACTGGAATAGCAGCCAAAGCTACGTTCTGACAAAAGGGTGGAGCCGCTTCGTCAAGGAGAAGAATCTCCACGCCGGAGACGTAGTCACCTTTCTCCGGTCAACCGGACAGGAGAAACAGCTCTACATTGACTTTAAGGCTCGGCATGGATCGGCGGCGATGATAGGTGAATCATACCCAGCGCCACCAGTTCAAGTAGTAAGACTCTTTGGGGTAAACATTTTGAAAGTACCTGGACATGGTGGTAGTAATATGGACAGCGCCGTCGCAATGGGTGGTTGCCATGGGAAAAGAATAAGAGATCAGGTTGAGCTTTTCGCTTTAGAGTGCAGTAAAAAACAAAGGGTAGTCGGAGCTTTATGA 1113 54.18 MDGSSVDESTASESTSISPVSPLAFPVTKCSSPLVGLSRMGSGTSVVVDSDPSTGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDIAAQRFRGRDAVTNFKPLADTTDDEIESAFLSSHSKSEIVDMLRKHTYRDELQQSKRKNGLLDGSGKRRSLGLTGTGQDRDSKTRDLLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGTASSKGVLLNLEDIGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLHAGDVVTFLRSTGQEKQLYIDFKARHGSAAMIGESYPAPPVQVVRLFGVNILKVPGHGGSNMDSAVAMGGCHGKRIRDQVELFALECSKKQRVVGAL 370
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 36122169 36123281 + Bma012445.1 Bma14g01697 95678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g01697 370 SUPERFAMILY DNA-binding domain 66 122 IPR016177 GO:0003677
Bma14g01697 370 MobiDBLite consensus disorder prediction 39 69 - -
Bma14g01697 370 CDD B3_DNA 194 281 IPR003340 GO:0003677
Bma14g01697 370 SUPERFAMILY DNA-binding pseudobarrel domain 193 293 IPR015300 -
Bma14g01697 370 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 1 370 IPR044800 GO:0003700
Bma14g01697 370 Gene3D AP2/ERF domain 66 123 IPR036955 GO:0003700|GO:0006355
Bma14g01697 370 ProSiteProfiles AP2/ERF domain profile. 67 122 IPR001471 GO:0003700|GO:0006355
Bma14g01697 370 SMART B3_2 195 297 IPR003340 GO:0003677
Bma14g01697 370 PANTHER PROTEIN RAV1, PUTATIVE-RELATED 1 370 - -
Bma14g01697 370 Pfam AP2 domain 67 114 IPR001471 GO:0003700|GO:0006355
Bma14g01697 370 Pfam B3 DNA binding domain 195 293 IPR003340 GO:0003677
Bma14g01697 370 MobiDBLite consensus disorder prediction 1 26 - -
Bma14g01697 370 Gene3D - 183 305 IPR015300 -
Bma14g01697 370 ProSiteProfiles B3 DNA-binding domain profile. 195 299 IPR003340 GO:0003677
Bma14g01697 370 CDD AP2 66 121 IPR001471 GO:0003700|GO:0006355
Bma14g01697 370 MobiDBLite consensus disorder prediction 1 22 - -
Bma14g01697 370 MobiDBLite consensus disorder prediction 157 188 - -
Bma14g01697 370 SMART rav1_2 67 128 IPR001471 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g00157 Bma14g01697 CCT
Bma01g00157 Bma14g01697 ECH
Bma14g01697 Bma15g00077 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma13g00743 Bma-Chr13:23317548 Bma14g01697 Bma-Chr14:36122169 1.93E-11 dispersed
Bma14g00089 Bma-Chr14:1257805 Bma14g01697 Bma-Chr14:36122169 7.84E-46 dispersed
Bma11g00635 Bma-Chr11:10967369 Bma14g01697 Bma-Chr14:36122169 2.71E-53 transposed
Bma01g00157 Bma-Chr1:1471963 Bma14g01697 Bma-Chr14:36122169 2.77E-157 wgd
Bma14g01697 Bma-Chr14:36122169 Bma15g00077 Bma-Chr15:893677 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58413 PF02362 B3 6.00E-29 CL0405 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g01697 K09287 - pvy:116107511 493.041