Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g01698 ATGGCGATCTGTGCTTCAATCGTTCATGGTGTCTCTCTGCAACTTTCGTCTCCCTTCTATGGCGAAGCCTCATCGTCTTCATTAAAATCATCATACATAGTGGATACCCCATTTTCCTTCTCACCCACTTCGCCTACTGGAAAGCCATCACGTTTTCATAAGCAGCTTGTCATTTTTTCGAAGAGGATTTCGGGTTTGGAGGAGGCTATGAGAATTCGAAGAGAAAGAGAGCTTCAAAGTGTGACTAAAGTTAGAAGGAGGCCACCTTTAAGGCGAGGAAGGGTGTCCCCATGTCTCCCTGTACCTGACCACATATTAAAGCCTTCTTATGTTGGCTCCCCTATTTTACCGGAAATTTCGAAGGATTTTCAAATTCACGATTCTGAAGGCATTGAGCATATGAGAGCGGCATGTGAGCTTGCTGCACGTGTCTTAGACTATGCAGGAACACTAGTTAAGCCATCTGTAACAACAAATGAGATTGACAAAGCAGTGCACCAGATGATCATCGAGGCAGGTGCTTATCCATCACCTCTTGGCTACGGGGGATTCCCAAAAAGTGTGTGCACATCAGTAAATGAGTGCATGTGCCATGGAATACCGGACTCTCGCCAGTTGCAGAGTGGGGATATAATAAACATCGACGTCACGGTTTATCTAAATGGATACCACGGAGACACATCGAAGATGTATTTTTGTGGCGATGTTAGTGATGGAATGAGACGATTGGTTAAGGTAACGGAGGAATGCTTGGAGAAAGGCATAGCTGTTTGCAAAGATGGTGCTAGTTTTAGTAAAATTGGAAAGAGAATTAGAGATGTCAATGGATGTAAATGCCATAAACCGTTCCCGGTCGTTTATTATGGGCACGAAATTGAACATTTACTTGAACTTGAAATCATGTATGATTTGAAACTGATGGAGCATCGAATGACTGATCATGCAATCTTTGAATTTGCGCTAACGGCAAATGATTTGCCCGGATCATTTCACAGCGAGCATGCCGAAAAATATGGTTTTGGAGTGGTGGAGCGATTTGTCGGACATGGTGTTGGGACTGTCTTTCACTCGGAGCCCCTTATCTTTCATGACCGTAACGACCAACCGGGTCGCATGGTGGAGGGTCAAACATTTACAATTGAACCAATTCTTACAATGGGAAGCACAGACTGCACTACCTGGCCGGACAACTGGACCACTCTAACGACTGACGGCAGCCCTGCTGCTCAGTTTGAGCACACTATCTTAATTACTCGAACCGGAGCCGAAATTTTAACAAAATGTTGA 1287 44.6 MAICASIVHGVSLQLSSPFYGEASSSSLKSSYIVDTPFSFSPTSPTGKPSRFHKQLVIFSKRISGLEEAMRIRRERELQSVTKVRRRPPLRRGRVSPCLPVPDHILKPSYVGSPILPEISKDFQIHDSEGIEHMRAACELAARVLDYAGTLVKPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQSGDIINIDVTVYLNGYHGDTSKMYFCGDVSDGMRRLVKVTEECLEKGIAVCKDGASFSKIGKRIRDVNGCKCHKPFPVVYYGHEIEHLLELEIMYDLKLMEHRMTDHAIFEFALTANDLPGSFHSEHAEKYGFGVVERFVGHGVGTVFHSEPLIFHDRNDQPGRMVEGQTFTIEPILTMGSTDCTTWPDNWTTLTTDGSPAAQFEHTILITRTGAEILTKC 428
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 36125380 36130006 + Bma012446.1 Bma14g01698 95679

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g01698 428 CDD MetAP1 131 427 IPR002467 GO:0006508|GO:0070006
Bma14g01698 428 Hamap Methionine aminopeptidase [map]. 123 428 IPR002467 GO:0006508|GO:0070006
Bma14g01698 428 PANTHER METHIONINE AMINOPEPTIDASE 12 273 - -
Bma14g01698 428 PANTHER METHIONINE AMINOPEPTIDASE 12 273 - -
Bma14g01698 428 PANTHER METHIONINE AMINOPEPTIDASE 331 427 - -
Bma14g01698 428 SUPERFAMILY Creatinase/aminopeptidase 125 428 IPR036005 -
Bma14g01698 428 Gene3D Creatinase/methionine aminopeptidase superfamily 88 428 IPR036005 -
Bma14g01698 428 PANTHER METHIONINE AMINOPEPTIDASE 331 427 - -
Bma14g01698 428 Pfam Metallopeptidase family M24 132 297 IPR000994 -
Bma14g01698 428 Pfam Metallopeptidase family M24 333 418 IPR000994 -
Bma14g01698 428 PRINTS Methionine aminopeptidase-1 signature 188 201 IPR001714 -
Bma14g01698 428 PRINTS Methionine aminopeptidase-1 signature 210 226 IPR001714 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g01698 K01265 map; methionyl aminopeptidase [EC:3.4.11.18] - jre:109002670 502.286
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g01156 Bma-Chr2:53513553 Bma14g01698 Bma-Chr14:36125380 7.90E-62 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g267 . . . . . . Bma14g01698 . . . . . . . . . . . . . . . . . . . . . . . . . . Cone6ag0467 Cone9ag0479 . . . . . Blo11g00831 . . Bpe11g01691 . . . . . . . . . . . . Bhi12g01373 . . . . . Lcy10g0912 . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002340 1 1 2 1 1 2 0 2 2 2 2 2 2 2 2 2 2 3 2 2 2 3 3 2 3 2 1 5 1 2 59