Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g01743 ATGTCTCGGGTACTGTTGGTTCTGATCGCGGGTCTGGTTTTGCTGAATTCCGGCGCTGCATACTCGTTTGGATCTCGGTCGATCCTTAGGGCGATAGGCGACGAGAAGGGCGATTCCCATGACTATGCCGTAGTTTTAAACGCAACCAATTTTGGGGAGGTTCTCGCGGATTCTCCAGCCCCCTTTGCCATTGTTGAATTTTTTGCCCACTGGTGCCCTGCTTGCCGAAACTATAAGCCTCAATATGAAAAAGTTGCTAGGCTTTTCAATGGACATGAAGCTGTTCATCCAGGGATGGTGTTGATGACTAGAGTTGATTGTGCACTGAAGATCAACACTAATCTATGTGATAAGTTCTCTGTGAATCGCTTTCCTATGCTCTTTTGGGGACCTCCTTCCAAGTTTGTATCTTCTGGTTGGGACCCTAAAGAAGGAAAAAGTGAAATAAGTTATATCGATGATGGACGCACAGCTGATCGATTGCTTAATTGGATAAACAAAAAAATGGGCAGCGCGTTTGGCTTAGATGATAAGAAGTTCGAAAATGAGCATATGTCACTTAATGCTTCAGACCCTGAACAGGTTGGACGAGCTGTGTTTGACATTGAGGAGGCAACAACTACTGCATTTGATATCATCTTAGCACATAAGATGATCAAGTCGGAAACTCGGGCATCATTTCTAAAGTTTCTTCAACTTATTGTGGCTCATCATCCTTCAAAGAGGTGCCGGAAAGGAAGTGCAGAGATCCTCATAAACTTCAATGACTTGTGGCCACTAGATACATTTGAAACGGAGAAACAGGGTGATCTTAATGTTGGTATAGGTGCACTAAAGATCGTTCAAATATGTGGAAAAGATATTCCTCGTGGTTATTGGATGTTCTGCCGTGGCAGCAGGAGCGATACCAGGGGTTTCAGCTGTGGATTATGGGTTCTACTTCATTCCCTTTCAGTGAGAATTGAGGATGGAGAGAGCCAGTTTGCATTTACTACAATTTGCGATTTCGTCCACAACTTCTTCATCTGCGAGGAATGTCGTCAACACTTCCACGAGATTTGTTCAAGGGTTTCTACTCCTATCAATAAGGCTCGTGACTTCGCCCTTTGGCTGTGGCAGTCACACAATGAAGTTAATGAAAGACTCGCCAAAGAAGAAGAAAATCTAGGCACTGGAGATCCCAAATTTCCAAAAATGATTTGGCCTCCTAAGCAACTTTGCCCTTCTTGTCATCAACTTCCCAGCGAAAACACTCAAACAAATCAGATAATCTGGAATGAGGACGAGGTTTATAAATTCTTGTCAAATTATTATGGGAGCATGCTTTTGTCCTTGTACAAAAAGAAGGCCGTTGTAGGGAATGATGAATCTGGAGGAGGTATTGAAGACTTGGTGCCTTCAACAAACGCTGTGGTGGTGCCTGTGGGGGCCGCTTTGGCCATTGCCTTTGCTGGTTGTGTATTTGGAGCTCTCGCTTGCTATTGGCGTATGCAGCAGAAGAGTCGGAAGCTGAGAAGATGA 1521 44.31 MSRVLLVLIAGLVLLNSGAAYSFGSRSILRAIGDEKGDSHDYAVVLNATNFGEVLADSPAPFAIVEFFAHWCPACRNYKPQYEKVARLFNGHEAVHPGMVLMTRVDCALKINTNLCDKFSVNRFPMLFWGPPSKFVSSGWDPKEGKSEISYIDDGRTADRLLNWINKKMGSAFGLDDKKFENEHMSLNASDPEQVGRAVFDIEEATTTAFDIILAHKMIKSETRASFLKFLQLIVAHHPSKRCRKGSAEILINFNDLWPLDTFETEKQGDLNVGIGALKIVQICGKDIPRGYWMFCRGSRSDTRGFSCGLWVLLHSLSVRIEDGESQFAFTTICDFVHNFFICEECRQHFHEICSRVSTPINKARDFALWLWQSHNEVNERLAKEEENLGTGDPKFPKMIWPPKQLCPSCHQLPSENTQTNQIIWNEDEVYKFLSNYYGSMLLSLYKKKAVVGNDESGGGIEDLVPSTNAVVVPVGAALAIAFAGCVFGALACYWRMQQKSRKLRR 506
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 37503194 37534875 - Bma012511.1 Bma14g01743 95724

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g01743 506 Pfam Erv1 / Alr family 308 401 IPR017905 GO:0016972
Bma14g01743 506 ProSiteProfiles Thioredoxin domain profile. 30 170 IPR013766 -
Bma14g01743 506 Gene3D ERV/ALR sulfhydryl oxidase domain 294 446 IPR036774 GO:0016972
Bma14g01743 506 PANTHER QUIESCIN Q6-RELATED SULFHYDRYL OXIDASE 22 504 IPR039798 GO:0016971
Bma14g01743 506 SUPERFAMILY Thioredoxin-like 43 170 IPR036249 -
Bma14g01743 506 PANTHER SULFHYDRYL OXIDASE 22 504 - -
Bma14g01743 506 ProSiteProfiles ERV/ALR sulfhydryl oxidase domain profile. 299 401 IPR017905 GO:0016972
Bma14g01743 506 Pfam Thioredoxin 44 134 IPR013766 -
Bma14g01743 506 Gene3D Glutaredoxin 34 199 - -
Bma14g01743 506 ProSitePatterns Thioredoxin family active site. 64 82 IPR017937 -
Bma14g01743 506 SUPERFAMILY FAD-dependent thiol oxidase 300 404 IPR036774 GO:0016972
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g01743 K10758 QSOX; thiol oxidase [EC:1.8.3.2] - zju:107429375 759.985
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma14g01743 Bma-Chr14:37503194 Bma01g02074 Bma-Chr1:76166100 1.45E-11 dispersed
Bma14g01743 Bma-Chr14:37503194 Bma01g00810 Bma-Chr1:7594493 1.93E-12 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g1052 . . . . . . Bma14g01743 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003860 2 2 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 0 1 1 1 1 1 2 9 1 45
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bma14g01743 Bma_Chr14 FPKM 1.475135 0.989087 1.625756 1.794839 1.533667 1.145975 1.345337 0.0 0.309046 0.0