Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g01747 ATGTCCATATTGTGCTCTTCCGATTGCTTCTCCGACCTTTTGTGCGATGAGGATTCATCCGGATTCTTGTCCAGAGATTCACTGGAATGCTCGTCGGAAATCGAGTGTGCTTCGGTCGTTGAGGAGTCAATCGCTGCTTGTATCGAAGAGGAGATGCAATTCGTGCCTGGTTTCGACTATTTCTCGCGATTTCTGACGAGTTCTCTGGACGCATCTGCCAGAGCGGATTCTGTTGCATGGATTCTCCTGGTTCAAGCCTACTATGGTTTCCATCCATTGACGGCGTATCTGGCTGTTAACTACTTGGATCGGTTCATCTATTCTCATGGTTTTCCGCAAGCAAATGGGTGGCCTTTGCAACTTTTATCTGTTGCTTGCTTGTCACTAGCAGCTAAAATGGAGGAGCCTTTGGCTCCTTGTTTATTGGACCTTCAGGTTGAGGGAGTCAAATATTTTTTTGAACCCAAAACAATATGTAGGATGGAGCTTCTGGTGCTGAGGGTCCTAGATTGGCGGTTGAGATCCATAACGCCATACAATTTTATTGAATTTTTCGCGTTCAAGGTTGATCCTACAGGAGCTTTCATCAGGTTTCTAATCTCAAGAGCCTCGGATATTATCTTATCCAATATCGAAGAAACTAGCTTCCTGGAATACCGACCATCATGCATAGCTGCCACAGCTTTGCTTTGTGCAACAAATGAAATCCCGAGTTTACCTCTAGTTAATCCGGAAGATGCTGAATTATGGTGCAATGGATTAAGCAAAGAAAGACTCATCAATTGCTATCAGTTAACGCAAAAATTGGTGCTTCATGGTAGCCTTAGGAAGCCCCCTAAAATCTTACCGCATCTCCGAGTTACACTTCAGGCTGAAATGAGGCTGATTGACTCATCTCCTCTGCCTTTCTCGTCCTCATCCATGTCTCATAAGAGGAGAAAATTAAGTACCTGCTTGTGGGTAGTTAATGACAAAGGAAACTCAGAGTGA 990 44.34 MSILCSSDCFSDLLCDEDSSGFLSRDSLECSSEIECASVVEESIAACIEEEMQFVPGFDYFSRFLTSSLDASARADSVAWILLVQAYYGFHPLTAYLAVNYLDRFIYSHGFPQANGWPLQLLSVACLSLAAKMEEPLAPCLLDLQVEGVKYFFEPKTICRMELLVLRVLDWRLRSITPYNFIEFFAFKVDPTGAFIRFLISRASDIILSNIEETSFLEYRPSCIAATALLCATNEIPSLPLVNPEDAELWCNGLSKERLINCYQLTQKLVLHGSLRKPPKILPHLRVTLQAEMRLIDSSPLPFSSSSMSHKRRKLSTCLWVVNDKGNSE 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 37599007 37601240 - Bma012516.1 Bma14g01747 95728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g01747 329 Gene3D - 57 174 - -
Bma14g01747 329 SMART Cyclin_C_2 176 299 IPR004367 -
Bma14g01747 329 CDD CYCLIN 74 166 IPR013763 -
Bma14g01747 329 PANTHER CYCLINS 7 318 IPR039361 -
Bma14g01747 329 Pfam Cyclin, N-terminal domain 45 173 IPR006671 -
Bma14g01747 329 Pfam Cyclin, C-terminal domain 176 271 IPR004367 -
Bma14g01747 329 SUPERFAMILY Cyclin-like 34 173 IPR036915 -
Bma14g01747 329 PANTHER CYCLIN-D1-1 7 318 - -
Bma14g01747 329 SUPERFAMILY Cyclin-like 158 268 IPR036915 -
Bma14g01747 329 Gene3D - 47 237 - -
Bma14g01747 329 SMART cyclin_7 79 167 IPR013763 -
Bma14g01747 329 ProSitePatterns Cyclins signature. 74 105 IPR006671 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00120 Bma-Chr2:1139056 Bma14g01747 Bma-Chr14:37599007 3.49E-54 dispersed
Bma05g00646 Bma-Chr5:37998883 Bma14g01747 Bma-Chr14:37599007 2.04E-37 dispersed
Bma06g00632 Bma-Chr6:33527117 Bma14g01747 Bma-Chr14:37599007 4.99E-126 dispersed
Bma14g01747 Bma-Chr14:37599007 Bma15g00199 Bma-Chr15:2027740 1.05E-88 dispersed
Bma14g01747 Bma-Chr14:37599007 Bma01g00063 Bma-Chr1:642030 8.38E-131 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g01747 K18810 - vvi:100255261 430.254