Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g01765 ATGTCTTCGATTCTCTCTCAAATCAGGCAGAAAAATGGTTCTCTGATTGACCCTCTTCTATTTCCTCTCCATTTTACTTCTTTCTCTTCTTCTTCTTCTTCTCCTCCTCCTCCTCCTCCTCCTTCATCTCCCCCATCTTCTAGCAGCAAAATAAGCCCAGCAATACTGTTTATCATAGTGATTCTAGCTGTAATATTCTTCATTTCCAGTGTTCTTCACCTGCTCGTGAGATTTTTCACTTGGCAAAGATCTTCATCCTTATCTGAATCCAATAGGATCCAAGCGAGCCATGACTCTGCTGCTTACCAGAGACAATTACAGCAACTCTTCGATCTTCATGATTCAGGTTTAGATCAATCTTTCATAGATGCACTTCCTGTATTCTTCTATAAAGAGATTGTGGGTCTGCAAGAGCCGTTTGATTGTCCAGTTTGTTTGTGTGAATTTTTAGAATTAGACAAATTAAGATTGCTTCCCATGTGCAGCCATGCTTTCCACATCGATTGCATCGACACATGGCTATTGTCTAACTCAACTTGCCCACTTTGTAGAGGAACCCTTTACACACCCGGATTTACTATCGAAAATTCGGTTTATGATTGTGAAGATCTAAGAGATGGAGGTCGGTTTCCGGGCAATTCTTGGGGAGAGGTTTCTTTGAGAATAAAGCCAGAAGAGTGTGAAATTGGCCTTGAAAAAAGGTATTTTCTGTGA 714 40.76 MSSILSQIRQKNGSLIDPLLFPLHFTSFSSSSSSPPPPPPPSSPPSSSSKISPAILFIIVILAVIFFISSVLHLLVRFFTWQRSSSLSESNRIQASHDSAAYQRQLQQLFDLHDSGLDQSFIDALPVFFYKEIVGLQEPFDCPVCLCEFLELDKLRLLPMCSHAFHIDCIDTWLLSNSTCPLCRGTLYTPGFTIENSVYDCEDLRDGGRFPGNSWGEVSLRIKPEECEIGLEKRYFL 237
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 37956137 37956850 - Bma012535.1 Bma14g01765 95746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g01765 237 SUPERFAMILY RING/U-box 121 190 - -
Bma14g01765 237 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 116 189 IPR013083 -
Bma14g01765 237 PANTHER RING-H2 FINGER PROTEIN ATL47-RELATED 29 212 - -
Bma14g01765 237 SMART ring_2 142 183 IPR001841 -
Bma14g01765 237 ProSiteProfiles Zinc finger RING-type profile. 142 184 IPR001841 -
Bma14g01765 237 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 29 212 - -
Bma14g01765 237 Pfam Ring finger domain 141 184 IPR001841 -
Bma14g01765 237 CDD RING-H2_PA-TM-RING 141 184 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma13g00520 Bma-Chr13:10372910 Bma14g01765 Bma-Chr14:37956137 6.41E-76 dispersed
Bma14g00158 Bma-Chr14:2167625 Bma14g01765 Bma-Chr14:37956137 9.31E-25 dispersed
Bma14g01765 Bma-Chr14:37956137 Bma15g00194 Bma-Chr15:1985408 1.27E-42 dispersed
Bma14g01765 Bma-Chr14:37956137 Bma14g01782 Bma-Chr14:38373802 4.56E-162 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g01765 - - vvi:100253470 268.47