Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g01772 ATGGATCCGCTATCAGTGAACCAGATGCATTTTCAGAGATCGAATTCTAATTCGGCGTGTTACAATCTATCGGAGATCTGGAACCTTCCCATCAACGGCGCTATTGAAAAATCTGGAGGAGGATTAAACTTAAGAACTCCTTGTTTTGGGAGGAGCTCGAGCATGATTGGGGACGTTTCGACTGCAGATTCGGCGAGCTTCGAGCAATTACCTGTCAATGGCGGTTGCAGAAAGAGAGGAGGCGGAGAGGACGAGTCTTCCAAGGGCCCGAGCTGCAGTAATGGAAAACGGAATAAGAAAGCAGGATCGAAGGAAGAGGGAGATGAAACAGTGAAGAAAGATTACATCCACGTTCGAGCAAGAAGGGGGCAAGCTACTGATAGTCACAGTTTAGCCGAGAGAGCTAGACGTGAAAAGATAAGCGAGAGAATGAAGATTCTCCAGGACATAGTTCCAGGGTGTAACAAGGTTATTGGGAAAGCAGTTGTTCTCGACGAGATTATCAATTACATTCAATCTCTACAACGTCAGGTTGAGTTTTTATCTATGAAGATTGAAGCAGTGAATTCGAAAACCATGTCCGACAATGCAATGGGAGAGTTTCCTTCAAAAGTTGTCTATGCTGGACAAGATTACAATGCTACTATTTCGGCATATCGTTCACAAATAAACAGAGAATACGACTGTGGATCACCGTCGCATGATTGGCTGACCGGCGGCTTCGAAAGAAGTAATAGATTAAAATTGTCGAGCTTCTCCTCGACCATCAATAAGACAATGTAG 783 44.44 MDPLSVNQMHFQRSNSNSACYNLSEIWNLPINGAIEKSGGGLNLRTPCFGRSSSMIGDVSTADSASFEQLPVNGGCRKRGGGEDESSKGPSCSNGKRNKKAGSKEEGDETVKKDYIHVRARRGQATDSHSLAERARREKISERMKILQDIVPGCNKVIGKAVVLDEIINYIQSLQRQVEFLSMKIEAVNSKTMSDNAMGEFPSKVVYAGQDYNATISAYRSQINREYDCGSPSHDWLTGGFERSNRLKLSSFSSTINKTM 260
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 38098924 38100397 + Bma012541.1 Bma14g01772 95753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g01772 260 MobiDBLite consensus disorder prediction 98 136 - -
Bma14g01772 260 CDD bHLH_AtBPE_like 114 190 - -
Bma14g01772 260 SMART finulus 130 180 IPR011598 GO:0046983
Bma14g01772 260 PANTHER BNAC05G07950D PROTEIN 89 244 - -
Bma14g01772 260 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 89 244 IPR024097 GO:0006355
Bma14g01772 260 MobiDBLite consensus disorder prediction 70 136 - -
Bma14g01772 260 Pfam Helix-loop-helix DNA-binding domain 128 175 IPR011598 GO:0046983
Bma14g01772 260 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 124 174 IPR011598 GO:0046983
Bma14g01772 260 Coils Coil 171 191 - -
Bma14g01772 260 Gene3D - 121 198 IPR036638 GO:0046983
Bma14g01772 260 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 122 191 IPR036638 GO:0046983
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma14g01772 Bma-Chr14:38098924 Bma15g00648 Bma-Chr15:9352134 1.26E-48 dispersed
Bma01g00077 Bma-Chr1:746806 Bma14g01772 Bma-Chr14:38098924 3.59E-58 wgd
Bma14g01759 Bma-Chr14:37842115 Bma14g01772 Bma-Chr14:38098924 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58420 PF00010 HLH 1.60E-08 No_clan Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g01772 - - mnt:21394273 224.942