Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g01797 ATGGATGAATTTTACGGACAGGAATCGAAATCGGAATATTCTGATAAAGCGTTGATGTCGCCGGAGAATATCATATTGCCGGTGGATTACCAAGGGTTGCTGGATTCCGGTGAATTCCGCGATAGGATTCCGGTGTTCGGATCCGATGACTTGCTTTCCGCGGCGTCGGCTATATCGGAAGCTGAGGCTGCTTCCATTTCCCCCAAAATTCGACGGCAAGAAGATGCGAACACTTTGATCAAAGCTAAAATTGCATCTCATCCTTATTATCTTCGTTTGCTAGAGGCTTACATCGATTGCCAGAAGGTGGGTGCGCCACCGGAAATAGCAGCTGTTTTGGAGGACATCCGGCGAGAAAACGACTTTTCAAAGCAAGACGTTGCCTCCACGTGTGGTGAAGTCGATCCATCTCTTGACGAGTTTATGGAAACCTACTGTGAGATGCTGGTGAAGTACAAGTCAGATCTCGAAAGACCTTTCGGTGAAGCAACCTCATTCTTGAACGAGATTGAAGAGCAGTTGAGCAATCTCTGCACTGGTCCATCGGTAAGAAGCATCTCCGATGAAGGTTTTGCATCATCAGATGATGAGTTGAGCGTAGGGAATGTAGAGTTCCAGGAAACTCAAACCAGGGGAGACGGCAAGGACCTGAAAGATAGACTTTTCCGCCGGTTCGGCAGCCATATTAGTAACCTGAAGCATGAGTTTTCAAAGAAGAAAAAGAAAGGAAAATTACCAAAGGAAGCTAAACAAGTACTTCTTGAATGGTGGAATGTTCACTACAAATGGCCTTATCCCACGGAAGCTGATAAAATTTCTCTGGCGGAGGCGACGGGATTAGATCCGAAACAAATAAACAACTGGTTCATTAATCAGCGGAAAAGACACTGGAAACCTACAGAGGGTATGCATTTTGAAGCGATGGAGAATCTGTCGGGGCGAATTCTTTACAGCTAA 957 45.77 MDEFYGQESKSEYSDKALMSPENIILPVDYQGLLDSGEFRDRIPVFGSDDLLSAASAISEAEAASISPKIRRQEDANTLIKAKIASHPYYLRLLEAYIDCQKVGAPPEIAAVLEDIRRENDFSKQDVASTCGEVDPSLDEFMETYCEMLVKYKSDLERPFGEATSFLNEIEEQLSNLCTGPSVRSISDEGFASSDDELSVGNVEFQETQTRGDGKDLKDRLFRRFGSHISNLKHEFSKKKKKGKLPKEAKQVLLEWWNVHYKWPYPTEADKISLAEATGLDPKQINNWFINQRKRHWKPTEGMHFEAMENLSGRILYS 318
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 38552455 38558282 - Bma012568.1 Bma14g01797 95778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g01797 318 Pfam Homeobox KN domain 256 295 IPR008422 GO:0003677|GO:0006355
Bma14g01797 318 SMART KNOX2_2 128 179 IPR005541 GO:0003677|GO:0005634
Bma14g01797 318 ProSitePatterns 'Homeobox' domain signature. 274 297 IPR017970 GO:0000981|GO:0006355
Bma14g01797 318 ProSiteProfiles ELK domain profile. 216 236 IPR005539 GO:0003677
Bma14g01797 318 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 40 315 - -
Bma14g01797 318 Pfam KNOX1 domain 80 121 IPR005540 GO:0003677|GO:0005634
Bma14g01797 318 ProSiteProfiles 'Homeobox' domain profile. 236 299 IPR001356 GO:0003677
Bma14g01797 318 SUPERFAMILY Homeodomain-like 237 307 IPR009057 -
Bma14g01797 318 Pfam KNOX2 domain 134 178 IPR005541 GO:0003677|GO:0005634
Bma14g01797 318 SMART HOX_1 238 303 IPR001356 GO:0003677
Bma14g01797 318 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 2 40 315 - -
Bma14g01797 318 Pfam ELK domain 216 237 IPR005539 GO:0003677
Bma14g01797 318 SMART KNOX1_2 78 122 IPR005540 GO:0003677|GO:0005634
Bma14g01797 318 SMART ELK_2 216 237 IPR005539 GO:0003677
Bma14g01797 318 CDD homeodomain 248 299 IPR001356 GO:0003677
Bma14g01797 318 Gene3D - 233 309 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma08g00095 Bma-Chr8:1177722 Bma14g01797 Bma-Chr14:38552455 1.13E-100 dispersed
Bma11g00018 Bma-Chr11:439380 Bma14g01797 Bma-Chr14:38552455 1.42E-72 dispersed
Bma12g01284 Bma-Chr12:45825046 Bma14g01797 Bma-Chr14:38552455 1.64E-13 dispersed
Bma14g00577 Bma-Chr14:6216736 Bma14g01797 Bma-Chr14:38552455 3.19E-29 dispersed
Bma14g01797 Bma-Chr14:38552455 Bma03g00692 Bma-Chr3:5810630 5.84E-23 dispersed
Bma14g01797 Bma-Chr14:38552455 Bma06g00609 Bma-Chr6:32446915 6.68E-138 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58422 PF03791 KNOX2 1.60E-22 No_clan Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g01797 - - csv:101211876 439.113