Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g01856 ATGTCGACGGCGGTTTTGCTCCGTCTGATCGTTCTTCTCCTTTGCGTCGCACTCCATCTGTCGCCGATCACTTCTCGCCAGCAGACCCGTCGGATCCTGCACCAACCGTTTTTCCCTCAAGATTCCTCTCCACCTTCTCAGCCTCCGTCGTTTTCTCCGCAGCCTCAGCAGCAGCAGCAGCAACAGCCTAAACTCCCATTCTCCTCCTCGTCTTCCCAGTCGCCGCCTCAGGCTTTCTTCCCGTTCTACCACACTCCGCCACCCCCTACACCCGCCACCGCTCTCGCTACATTTCCCGCCAACATTTCCTCCCTTCTTTTGCCCCAACCCACCTCTCACCCTCACAGTCACATCCTCGCCATCGCTGTTTCTGCCTCTCTCCTCTCTGCCGCTCTCTTCGCAGCGCTCGCCGCTTTCCTTTTTTACCGAAAGAATCGTGCTGTTCGTCTCGGAGGCAAGATCTCGAGAACCGACAGTCTCAGTTTATATCCACCTAACATCGCCACCTCCGATGGTGGTTTCAAGGCGCGTCGCACACTAAACACGAGCTCAGAGTTTCTCTACCTTGGAACATTAGTGAATTCTAGAGGTATCTATGAGGAAAATGTGGAGAGCGGTTGCGGCGGTGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCCCCGCCACCGCTCTCGCTACATTTCCCGCCAACATTTCCTCCCTTCTTTTGCCCCAACCCACCTCTCACCCTCACAGTCACATCCTCGCCATCGCGAAAGTCTGATTCATCAGTACCAGAAATGCCACTTCAGACTGGAGATACGGCTGCTGTGGAGTCCATCACCGTCCCCTCCTCCCCCTCCACCTCCTCCACGGAAGCTCTGGGAGATTCCAGCTCCAGCAAACCTCACTAAAGAGCCTAACTTAAGACCCCCTGTCCTCCTTACGCCATCAAGACCTACTGGATTCCAAAATTTTGCTCCAATTTCTTCTTCCGATCAACTCATGGCGGAAGGAAGCGACGAAACTCCAAAGCCAAAGTTGAAGCCTTTACATTGGGACAAGGTTAGGGCGAGCTCCGACAGAGCTATGGTTTGGGATCAGATTAAATCCAGCTCTTTCCAGTTAAACGAGGAAATGATTGAGACACTTTTCATGGCCAATAATCCAAACTCCACGCAGAAAGATAATGTTAGGCGATCAGTAATCCCTCCCCCTAACCAGGAGAACTGGGTTCTTGATTCCAAGAAGTCTCAGAACATTGCGATTTTGCTGAGGGCACTGAATGTCACCGCTGATGAAGTTTGTGAAGCCCTTTTGGAAGCAGGCAATGCCGATAGTTTGGGTGCAGAATTACTCGAAAGTTTGTTGAAGATGGCACCCACCAAAGAAGAGGAAATCAAACTGAGAGAATTTAAAGACGAATCCCCGTTTAAGCTTGGCTCGGCAGAGAAATTTCTCAAGGCAGTTCTCGATATACCATTTGCGTTTCGGAGGATAGATGCAGCTGCTTGTGAAGAATTGAAGACGAGCCGAATGTTCCTCAAACTTCTAGAAGCTGTGCTCAAAACTGGAAACCGTATGAATGTTGGAACAAACCGAGGCGATGCTCATGCCTTTAAACTCGACACCCTTCTCAAGCTCGTTGATATAAAAGGAGCTGATGGAAAAACAACTCTTTTGCACTTTGTCGTCCAGGAAATTATAAAAGCCGAAGGCTTTCGTCTTTCTGGGTCCAACCAGCGAGCAACAATCGACAACAATCAGCCATCATCTTTGACCGATGATGTTCGGCTTAAAAAACTAGGCCTGCAAGTAGTTTCAGGTCTGAGTGGGGAGCTTTCAAATGTGAAGAAAGCTGCTGCAATGGACTCCGAAACTCTAAGAAACGAGGCTTCAAAACTTGTTGGAGGGATTGAGAAAATTGAGGATGTGGTGAAGTTAAACGAAGAGATAGCCTTGAAAACGAATAGCTGGAAGTTCTCAGAGTCGATGAAAGAGTTTCTGTGCAAAGCAGAAGAAGAAATTATCAGAACCCAAGCACAAGAGAGCGTTGCTCTTTCTATGGTGAAGGAAGTGACAGAGTACTTCCATGGCAACTCAGCTATGGAAGAAGCTCATCCTCTCCGTATTTTCACAGTCGTGAGGGATTTTCTTGCAATACTCGACCAGGTTTGCAAGGAGGTAGGGAAAATTAATGAACGAGCGATAGTGGGGTCTACTCGTCTATTTCCCGTTCCGGTGAATCCAACTCTCGCACCAGCTTTTCCGGGCCGACAGCATTCTGGTTCTTCAGAAGATGAAAGCTCATCAATGTCGTCACCTTAG 2781 52.39 MSTAVLLRLIVLLLCVALHLSPITSRQQTRRILHQPFFPQDSSPPSQPPSFSPQPQQQQQQQPKLPFSSSSSQSPPQAFFPFYHTPPPPTPATALATFPANISSLLLPQPTSHPHSHILAIAVSASLLSAALFAALAAFLFYRKNRAVRLGGKISRTDSLSLYPPNIATSDGGFKARRTLNTSSEFLYLGTLVNSRGIYEENVESGCGGGSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPRHRSRYISRQHFLPSFAPTHLSPSQSHPRHRESLIHQYQKCHFRLEIRLLWSPSPSPPPPPPPPRKLWEIPAPANLTKEPNLRPPVLLTPSRPTGFQNFAPISSSDQLMAEGSDETPKPKLKPLHWDKVRASSDRAMVWDQIKSSSFQLNEEMIETLFMANNPNSTQKDNVRRSVIPPPNQENWVLDSKKSQNIAILLRALNVTADEVCEALLEAGNADSLGAELLESLLKMAPTKEEEIKLREFKDESPFKLGSAEKFLKAVLDIPFAFRRIDAAACEELKTSRMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDIKGADGKTTLLHFVVQEIIKAEGFRLSGSNQRATIDNNQPSSLTDDVRLKKLGLQVVSGLSGELSNVKKAAAMDSETLRNEASKLVGGIEKIEDVVKLNEEIALKTNSWKFSESMKEFLCKAEEEIIRTQAQESVALSMVKEVTEYFHGNSAMEEAHPLRIFTVVRDFLAILDQVCKEVGKINERAIVGSTRLFPVPVNPTLAPAFPGRQHSGSSEDESSSMSSP 926
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 39922732 39927124 + Bma012637.1 Bma14g01856 95837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g01856 926 PANTHER FORMIN-LIKE PROTEIN 1 654 922 - -
Bma14g01856 926 Gene3D Formin, FH2 domain 483 653 IPR042201 -
Bma14g01856 926 MobiDBLite consensus disorder prediction 204 389 - -
Bma14g01856 926 PANTHER FORMIN-RELATED 654 922 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Bma14g01856 926 PANTHER FORMIN-RELATED 10 204 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Bma14g01856 926 Gene3D Formin, FH2 domain 654 890 IPR042201 -
Bma14g01856 926 MobiDBLite consensus disorder prediction 36 83 - -
Bma14g01856 926 PANTHER FORMIN-LIKE PROTEIN 1 10 204 - -
Bma14g01856 926 PANTHER FORMIN-LIKE PROTEIN 1 422 653 - -
Bma14g01856 926 SUPERFAMILY Formin homology 2 domain (FH2 domain) 433 886 - -
Bma14g01856 926 Pfam Formin Homology 2 Domain 491 653 IPR015425 -
Bma14g01856 926 Pfam Formin Homology 2 Domain 654 873 IPR015425 -
Bma14g01856 926 ProSiteProfiles Formin homology-2 (FH2) domain profile. 489 899 IPR015425 -
Bma14g01856 926 MobiDBLite consensus disorder prediction 206 381 - -
Bma14g01856 926 PANTHER FORMIN-RELATED 422 653 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Bma14g01856 926 SMART it6_source 489 888 IPR015425 -
Bma14g01856 926 MobiDBLite consensus disorder prediction 53 79 - -
Bma14g01856 926 MobiDBLite consensus disorder prediction 905 926 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma14g00359 Bma-Chr14:4370430 Bma14g01856 Bma-Chr14:39922732 1.52E-108 dispersed
Bma14g01856 Bma-Chr14:39922732 Bma14g01752 Bma-Chr14:37740998 2.37E-74 dispersed
Bma14g01856 Bma-Chr14:39922732 Bma06g00347 Bma-Chr6:7727513 6.02E-133 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g01856 - - qsu:112019995 672.159