Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g01888 ATGGAAAATTTTCAGGGTCTTCTTAAAATTAGGGTCAAGAAAGGAATCAATCTCGCCGTTCGTGATATCAGAACCCGCAGCAGTGATCCATACGTCGTTATTTCAATGGGTCAACAGAGAATGAAGACCCGTGTGGTGAAGAAAAACTGCAATCCGGTTTGGAATGACGATTTCACTCTTTCCATTTCAAATCTCAACACTCCAATAACCCTAACAGTATTTGACAAAGACAGGTTCACAGGAGATGACAAAATGGGCAATGCAGAGATTGACATTAAACCCTACATAGAGTGTCTTTCAATGGGGTTGAAGGATCTGCCCAAGGGTTGTGTTGTTAAAAGAATTCAGCCAGACCAGACGAACTGTCTCTCCGACGAGAGCACGTTTGTTTGGGACGATGGAAAAATTGTTCAAGAAATGCCGCTCAGGTTGAAGAATGTGGAGTGTGGAGAAGTTGTGATTCAAATTGAATTGATCGTCGGCCCTGGATCTAGACCTAATTGGGGAATTTGA 513 42.69 MENFQGLLKIRVKKGINLAVRDIRTRSSDPYVVISMGQQRMKTRVVKKNCNPVWNDDFTLSISNLNTPITLTVFDKDRFTGDDKMGNAEIDIKPYIECLSMGLKDLPKGCVVKRIQPDQTNCLSDESTFVWDDGKIVQEMPLRLKNVECGEVVIQIELIVGPGSRPNWGI 170
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 40383250 40384424 + Bma012674.1 Bma14g01888 95869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g01888 170 Gene3D C2 domain 2 167 IPR035892 -
Bma14g01888 170 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 10 1 163 - -
Bma14g01888 170 Pfam C2 domain 7 94 IPR000008 -
Bma14g01888 170 ProSiteProfiles C2 domain profile. 1 108 IPR000008 -
Bma14g01888 170 PRINTS C2 domain signature 24 36 IPR000008 -
Bma14g01888 170 PRINTS C2 domain signature 48 61 IPR000008 -
Bma14g01888 170 PRINTS C2 domain signature 69 77 IPR000008 -
Bma14g01888 170 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 93 IPR035892 -
Bma14g01888 170 SMART C2_3c 7 104 IPR000008 -
Bma14g01888 170 CDD C2_ArfGAP 6 150 - -
Bma14g01888 170 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 163 IPR044562 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma14g01888 Bma-Chr14:40383250 Bma15g00044 Bma-Chr15:614208 3.96E-103 dispersed
Bma14g01888 Bma-Chr14:40383250 Bma14g01916 Bma-Chr14:40896233 1.36E-120 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g01888 - - zju:107429323 248.054