Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g01896 ATGACGAAATCGAAGAATTTCATCAATCATTTCATTAAACCGTTTAAATTCGGTTCTTCCAGAGAGGGCGACGCAGAGGAAGACTTGGAGAAGATTGCTGCGCAGGAGCAGAAGCAGTTTCCGTTTGATACTTTAGTAGCAGCGACGAGAAATTTTCATCCCAATCAGAAGCTTGGCGAAGGCGGCTTTGGACCTGTTTTTAAGGGAAAGTTGGATGATGGAAGAGAGATTGCAGTGAAAAAGTTGTCTCAAAGCTCAAAACAAGGGACGAAAGAGTTCAGAAACGAAGCAAAATTGTTGGCAAAAGTTCAGCATCGGAATGTTGTGAATTTGTTGGGATATTGCGTGAACGGAGCCGATAAGCTACTCGTTTATGAATACGTCTCTAACGAGAGCCTCGACAAGCTTCTCTTCAAATCTAATCGAAGAGTGGAGCTTTATTGGAATCAAAGATTCGAGATAATCTGTGGCATCGCACGAGGATTGCTTTACCTTCACGAGGACTCTCCCAATGTTATCATCCATCGTGATATAAAGGCAAGCAATATTTTACTCGATGATAAGTGGGTACCTAAAATTGCCGATTTTGGTATGGCTCGACTCTTCCCTGAAGATCAAACACACATCAACACTCGTGTAGCTGGAACCAATGGGTACATGGCACCCGAATATATGATGAGCGGCCACTTAACGGTGAAGGCAGATGTTTTTAGCTTCGGCGTGTTGGTTCTCGAACTTATAAGTGGACAGAAAAACTCTTCGTTCGCTTCATTTACTGATGGAAGTACTCTACTAGAACGGGCATACAAGCTTTACAAAAACGGTAAAAGCATGGAGATTGTGGACTCCAGGTTGGCTGAATCAGCCTCTCCGGAGCAAATGGCGATGTGCATTCAGCTCGGACTGCTTTGCGTGCAGGGCGATCTGCAGCTACGTCCCACCATGGGACGTGTGGTTGTGATGTTATCAAAAAAGCACGGAAATTTGGACGAACCGACTAGACCTGGCATACCGGGTTCACTATTTAGACGTGCTAGGCGGCATGGTGGAGGGTCCGAAATTTTGACTGACTCACATTCAAATACATCGGAATCGAGTTCTACTAATACTGCAACTGCATCAGCATCTGCACGCCCATCTACTTCGGCATCTACACGCGCATCTACGTCGGCATCTGCACGCACATCTACGTCGGCATCTGCACGCAGGTAA 1212 45.71 MTKSKNFINHFIKPFKFGSSREGDAEEDLEKIAAQEQKQFPFDTLVAATRNFHPNQKLGEGGFGPVFKGKLDDGREIAVKKLSQSSKQGTKEFRNEAKLLAKVQHRNVVNLLGYCVNGADKLLVYEYVSNESLDKLLFKSNRRVELYWNQRFEIICGIARGLLYLHEDSPNVIIHRDIKASNILLDDKWVPKIADFGMARLFPEDQTHINTRVAGTNGYMAPEYMMSGHLTVKADVFSFGVLVLELISGQKNSSFASFTDGSTLLERAYKLYKNGKSMEIVDSRLAESASPEQMAMCIQLGLLCVQGDLQLRPTMGRVVVMLSKKHGNLDEPTRPGIPGSLFRRARRHGGGSEILTDSHSNTSESSSTNTATASASARPSTSASTRASTSASARTSTSASARR 403
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 40558616 40560983 + Bma012682.1 Bma14g01896 95877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g01896 403 SMART serkin_6 52 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma14g01896 403 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Bma14g01896 403 CDD STKc_IRAK 58 324 - -
Bma14g01896 403 Gene3D Phosphorylase Kinase; domain 1 17 127 - -
Bma14g01896 403 PANTHER RECEPTOR-LIKE KINASE 3 374 - -
Bma14g01896 403 Pfam Protein tyrosine and serine/threonine kinase 55 320 IPR001245 GO:0004672|GO:0006468
Bma14g01896 403 ProSiteProfiles Protein kinase domain profile. 52 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma14g01896 403 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 3 374 - -
Bma14g01896 403 Gene3D Transferase(Phosphotransferase) domain 1 128 333 - -
Bma14g01896 403 MobiDBLite consensus disorder prediction 354 403 - -
Bma14g01896 403 SUPERFAMILY Protein kinase-like (PK-like) 38 338 IPR011009 -
Bma14g01896 403 MobiDBLite consensus disorder prediction 350 403 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g01087 Bma-Chr6:47708158 Bma14g01896 Bma-Chr14:40558616 4.81E-138 dispersed
Bma14g01896 Bma-Chr14:40558616 Bma07g00326 Bma-Chr7:4240191 3.16E-114 dispersed
Bma14g01896 Bma-Chr14:40558616 Bma07g00320 Bma-Chr7:3862097 4.38E-109 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66919 PF07714 PK_Tyr_Ser-Thr 4.30E-49 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g01896 - - zju:107429294 556.214