Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g01919 ATGGAGGACGAAATAATGAAGAAGTTTGACATGCAGAAACTATTATCGTCCTCAAACGCCATTCGTATTGCAGACATGGGATGTGCAGTTGGTCCAAACACTTTCTTAATCATGCAAAACTTGGTAGAATTCATAAAAAACAAGCATATTTCTCAGTGCCCTAATTCCCCGATCCCGGATTTTCAAGTATTTTTCAACGATCAAACCTCAAACGATTTCAATGCCCTCTTCCGCTCTCTCCCACAAAAGCACTGTTATTTTGCAGCCGGAGTCCCTGGTTCTTTCTACGGCCAGCTTTTTCCGACATCCTCTCTTCACTTGGTCCACTCTTGTTATTCTCTAAACTGGCTTTCAGGCTTACCAGAAGAAGTGAAGAACAAGGGGAAAATACACTATGCGAATGCCCCTGACGAAATATTTGAGGCTTATTCGGCTCAGTTCGTTAGGGATATGAACAATTTTCTTAGGGCTAGAGCTAAAGAGCTTGTGCATGGAGGATTAGTGATGATTATAACCTCCACAATCCCTTGCCACATGCCAATTTCACAACTTCCGCTAGGAATATTGTTTGATTGCATGTCAACTACGCTCATCGACATGGCGAAAGAGGGACTGGTCGAAGAAGCCGAGGTGGATTCATTCAACTTTCCTATGTATTCAACAACTCTTGAGGAGATGGAACAAATTGTGGAGAAAGAAGGAAGTTTCAGTTTAGAAAGAATGGAAGCATCTGATCCGGTATCATGGACAGGAGACACTCTGGATGCCGAAGATTGGATCAACCATATAAGAGCTGCAATGGAAGCAACTTTCTGTGCTCATTTCGGGGTCAAGATTGTTGATGAAATGTTTCGAAGGCTTCACACAAAATCATCTTATCTTCTAGAGAAAGTCCATGGGAAACTCCATGAAAAGGTTCAACTTTTTATTGTTTTGAAGCGTAAAGATAACTAA 954 41.61 MEDEIMKKFDMQKLLSSSNAIRIADMGCAVGPNTFLIMQNLVEFIKNKHISQCPNSPIPDFQVFFNDQTSNDFNALFRSLPQKHCYFAAGVPGSFYGQLFPTSSLHLVHSCYSLNWLSGLPEEVKNKGKIHYANAPDEIFEAYSAQFVRDMNNFLRARAKELVHGGLVMIITSTIPCHMPISQLPLGILFDCMSTTLIDMAKEGLVEEAEVDSFNFPMYSTTLEEMEQIVEKEGSFSLERMEASDPVSWTGDTLDAEDWINHIRAAMEATFCAHFGVKIVDEMFRRLHTKSSYLLEKVHGKLHEKVQLFIVLKRKDN 317
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 40970258 40971397 - Bma012709.1 Bma14g01919 95900

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g01919 317 Gene3D - 119 292 IPR042086 -
Bma14g01919 317 Gene3D Vaccinia Virus protein VP39 5 248 IPR029063 -
Bma14g01919 317 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 2 314 IPR005299 GO:0008168
Bma14g01919 317 Pfam SAM dependent carboxyl methyltransferase 15 314 IPR005299 GO:0008168
Bma14g01919 317 PANTHER METHYLTRANSFERASES SUPERFAMILY PROTEIN, PUTATIVE-RELATED 2 314 - -
Bma14g01919 317 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 15 315 IPR029063 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g01919 - - - jre:109018914 357.451
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma08g00047 Bma-Chr8:668568 Bma14g01919 Bma-Chr14:40970258 5.42E-76 dispersed
Bma14g01919 Bma-Chr14:40970258 Bma03g00940 Bma-Chr3:9921252 4.70E-59 dispersed
Bma14g01918 Bma-Chr14:40943164 Bma14g01919 Bma-Chr14:40970258 7.79E-35 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g510 . . . . . . Bma14g01919 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Vvi1g511 . . . . . . Bma14g01919 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002487 1 2 0 2 1 2 1 2 2 2 2 2 1 2 2 1 2 0 1 2 2 1 2 2 2 2 2 2 3 11 59
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bma14g01919 Bma_Chr14 FPKM 10.068386 12.045829 0.799066 0.974367 3.090413 3.138828 3.915505 2.679756 2.366492 2.454717