Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g01923 ATGCCGCAGACCCACCACTCTGTGGTTGTGAGACTGAATGAGCAAACTGGTACAAAAAAAGGGTCCACATTCATTCAGGCTCACAGGGCTTGGCTTCCAAAATTTCTCTTACTTTGGATTATGGTAGTGGTGTTCATTAGTATGATCATATACAATGGCATGGATGCCGACAACAAAGTTCGAAGGAAGGAAGTTTTAGGTAGCATGTGTGATCAAAGGGCAAGAATGCTTCAAGATCAATTCAGTGTTAGCGTTAACCATGTCCATGCATTGGCTATTCTCGTTTCAACCTTTCATTATTTCAAGAACCCGTCTGCAATTGATCAGGAAACTTTTGCAGAATACACGGCCAGAACTGCATTTGAGCGACCATTACTGAGTGGGGTGGCGTTTGCAGAGAGAGTAATTGATTCTGAGAGGGCTACTTTCGAGAAGCAACATGGATGGACCATAAAAACAATGGAGAGAGAACCTTCACCTACACGGGATGAGTATGCGCCTGTCATCTTGTCTCAGGAAACTGTGTCTTACCTTAAGTCTATTGATATGATGTCGGGAGAGGAGGATCGTGAAAACATATTGAGGGCAAGGGCCACTGGGAAAGCTGTTTTGACCAGCCCCTTCAGTTTGCTAGGTTCTCATCATCTTGGAGTTGTGTTGACATTTCCTGTTTATAAATCCAAACTGCCATCCAATCCCACCGTGGAAGAGCGCATACAAGCAACTGCTGGATACCTTGGCGGAGCCTTTGACATTGAATCATTGGTGGAGAATTTGCTCGGGCAACTTGCCGGAAATCAAGCAATTTTGGTGAATGTATATGATATCACTAATGCCTCTGATCTCTTAATCATGTATGGTCATCAATATCAAGATGGCGACGATTCACTTTTGCATGAGAGCAAGCTTGATTTTGGTGATCCCTTTAGGAAGCATCAAATGATATGTAGATATCATCAAAAGGCACCCACTTCATGGACAGCACTTACTACTGCGTTTTTGTTCTTTGTAATTGGATTATTGGTGGGCTATATATTATATGGGGCAGCAACCCACATTGTTAAAGTAGAAGATGATTTTCATGGAATGCAGGAATTAAAAGTTCTTGCCGAAGCTGCTGATGTTGCAAAATCTCAGTTTCTTGCAACCGTGTCTCATGAAATCAGGACACCGATGAATGGCATTCTCGGAATGCTTGCTCTACTTCTTGATACTGATTTAAGCTCAACACAAAGAGACTATGCCCAAACGGCCCAAGCCTGTGGAAAGGCACTCATTGCATTGATAAATGAGGTGCTTGATCGGGCGAAAATCGAAGCTGGGAAGTTAGAGCTTGAAGCCGTGCCCTTTGATCTTAGATCAATACTAGATGATGTCCTCTCTTTATTTTCTGAAAAATCAAGGCACAAGAGTATAGAGCTGGCTCTATTTGTTTCCGATAAAGTTCCAGAATTTGTCGTTGGTGATCCTGGAAGATTCAGACAAATCATCACAAATCTTGTCGGTAACTCCGTTAAATTTACAGAACAAGGACATATATTTGTTAAAGTTCACCTGGTAGAACACTCCAGGCCCACATCAAATGGAAAATCTGAAATTTATTCGAATGGAAGATCAGATGAAAGTGTGTTAATCCATGGTAGCTGCCAGTTTAAAACATTAAGTGGATACGAGGCAGCAGACGATCAAAACAGTTGGGAAAAATTCAAGCATCTTGTTTCCGAAGAAGAGTATAAACCCGACACATTAAGCAACAGAACAGCTATGAAGGAAAATAACAATTCTGAGCTCGTCACATTAATGGTATGTGTTGAGGATACAGGGATCGGAATCCCATTATGTGCCCAAAATCGAGTTTTCATGCCTTTTGTGCAAGCCGACAGCTCAACTTCGAGACACTACGGAGGAACTGGTATTGGCTTAAGCATCAGTAAATGCTTAGTTGAATTAATGGGTGGTGGTATAAGCTTCATTAGTAGACCTCAGATTGGAAGCACATTTTCTTTCACTGCTGTTTTTGGGAAATGGCAGAAAAATTCAGTGAATGACTTGAAAAAGACCAATTCTGAAGAACTGCCTTCTGGCTTTAGAGGATTGAAGGCCATTGTCGTAGATGGGAAGCCGGTTAGAGCATCCGTGACGAAATACCATTTGAAGAGACTCGGCATTTGTGTTGAGGTTGTGAGTAGCATCAAAATGGCAGCTTCATTTCATGGCAAAAACGGTTCTGCTATTGCTTCAGGGAACATGTTCGAGCCGGATGTGATTTTGGTAGAGAAAGATTCTTGGGTTGTCGAAGAGGATTGTAATTTCAATCTGCACCAGCCAGAACGTAAACCGAACGGTTGCATATTCAAATTACCAAAAATGATTCTTTTGGCAACAAATATCAGCATAGGAGAATTTGATAGAGCCAATGCTTGGGGCTTTGCAGACACTGTGATAATTAAGCCATTGAGGGCAAGCATGGTTGCAGCATGTCTTCAACAAGTACTAGGAATCGGCAAAATGAGGCAACAAGGAAAGGACTTCCCGGGTGACTCGAAAAAGTCTATTAAAAGCCTGCTTTGTGGGAAGAAAATATTGGTGGTTGACGATAATAGGGTCAACCTGAGAGTTGCAGCCGGTGCTCTGAAGAAGTTTGGTGCCAACGTGGAATGTGCAGAGAGTGGTAAAGCTGCCATGGAGTTGCTTAAACCTCCTCACAGCTTTGATGCTTGCTTCATGGATATCCAAATGCCAGAAATGGACGGATTTGAGGCGACCTGCCGGATTCGGCAGATGGAGAGCAAGGCAAACAAGCAAATGAACGGAGAATTCTTGGGCGAAGGAAACGACGGCAAAGACAAGTGGCATGTGCCGATATTAGCAATGACAGCTGATGTAATACACGCAACTTATGAAGAGTGCTTAAAATGTGGAATGGATGGCTACGTTTCTAAGCCTTTTGAGGAAGAAAATCTTTACCAAGCTGTCTCAAAATTCTTCAACTCATAG 2997 42.54 MPQTHHSVVVRLNEQTGTKKGSTFIQAHRAWLPKFLLLWIMVVVFISMIIYNGMDADNKVRRKEVLGSMCDQRARMLQDQFSVSVNHVHALAILVSTFHYFKNPSAIDQETFAEYTARTAFERPLLSGVAFAERVIDSERATFEKQHGWTIKTMEREPSPTRDEYAPVILSQETVSYLKSIDMMSGEEDRENILRARATGKAVLTSPFSLLGSHHLGVVLTFPVYKSKLPSNPTVEERIQATAGYLGGAFDIESLVENLLGQLAGNQAILVNVYDITNASDLLIMYGHQYQDGDDSLLHESKLDFGDPFRKHQMICRYHQKAPTSWTALTTAFLFFVIGLLVGYILYGAATHIVKVEDDFHGMQELKVLAEAADVAKSQFLATVSHEIRTPMNGILGMLALLLDTDLSSTQRDYAQTAQACGKALIALINEVLDRAKIEAGKLELEAVPFDLRSILDDVLSLFSEKSRHKSIELALFVSDKVPEFVVGDPGRFRQIITNLVGNSVKFTEQGHIFVKVHLVEHSRPTSNGKSEIYSNGRSDESVLIHGSCQFKTLSGYEAADDQNSWEKFKHLVSEEEYKPDTLSNRTAMKENNNSELVTLMVCVEDTGIGIPLCAQNRVFMPFVQADSSTSRHYGGTGIGLSISKCLVELMGGGISFISRPQIGSTFSFTAVFGKWQKNSVNDLKKTNSEELPSGFRGLKAIVVDGKPVRASVTKYHLKRLGICVEVVSSIKMAASFHGKNGSAIASGNMFEPDVILVEKDSWVVEEDCNFNLHQPERKPNGCIFKLPKMILLATNISIGEFDRANAWGFADTVIIKPLRASMVAACLQQVLGIGKMRQQGKDFPGDSKKSIKSLLCGKKILVVDDNRVNLRVAAGALKKFGANVECAESGKAAMELLKPPHSFDACFMDIQMPEMDGFEATCRIRQMESKANKQMNGEFLGEGNDGKDKWHVPILAMTADVIHATYEECLKCGMDGYVSKPFEEENLYQAVSKFFNS 998
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 41020093 41025734 - Bma012713.1 Bma14g01923 95904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g01923 998 Gene3D - 54 106 - -
Bma14g01923 998 Pfam CHASE domain 106 286 IPR006189 -
Bma14g01923 998 Pfam Response regulator receiver domain 861 992 IPR001789 GO:0000160
Bma14g01923 998 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 370 442 IPR036097 GO:0000155|GO:0007165
Bma14g01923 998 SMART REC_2 859 992 IPR001789 GO:0000160
Bma14g01923 998 CDD REC_hyHK_CKI1_RcsC-like 861 992 - -
Bma14g01923 998 SMART HisKA_10 376 441 IPR003661 GO:0000155|GO:0007165
Bma14g01923 998 Coils Coil 426 446 - -
Bma14g01923 998 Gene3D - 854 998 - -
Bma14g01923 998 PANTHER HISTIDINE KINASE 4 18 998 - -
Bma14g01923 998 SMART HKATPase_4 488 675 IPR003594 -
Bma14g01923 998 ProSiteProfiles CHASE domain profile. 103 315 IPR006189 -
Bma14g01923 998 ProSiteProfiles Response regulatory domain profile. 860 996 IPR001789 GO:0000160
Bma14g01923 998 Gene3D - 350 439 - -
Bma14g01923 998 CDD HisKA 376 437 IPR003661 GO:0000155|GO:0007165
Bma14g01923 998 ProSiteProfiles Response regulatory domain profile. 700 832 IPR001789 GO:0000160
Bma14g01923 998 PRINTS Bacterial sensor protein C-terminal signature 600 614 IPR004358 GO:0016310|GO:0016772
Bma14g01923 998 PRINTS Bacterial sensor protein C-terminal signature 618 628 IPR004358 GO:0016310|GO:0016772
Bma14g01923 998 PRINTS Bacterial sensor protein C-terminal signature 659 672 IPR004358 GO:0016310|GO:0016772
Bma14g01923 998 PRINTS Bacterial sensor protein C-terminal signature 635 653 IPR004358 GO:0016310|GO:0016772
Bma14g01923 998 SUPERFAMILY CheY-like 858 996 IPR011006 -
Bma14g01923 998 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 430 670 IPR036890 -
Bma14g01923 998 Gene3D - 440 675 IPR036890 -
Bma14g01923 998 PANTHER TWO-COMPONENT HISTIDINE KINASE 18 998 - -
Bma14g01923 998 CDD HATPase_EvgS-ArcB-TorS-like 493 673 - -
Bma14g01923 998 Pfam His Kinase A (phospho-acceptor) domain 376 441 IPR003661 GO:0000155|GO:0007165
Bma14g01923 998 Gene3D CHASE domain 107 322 IPR042240 -
Bma14g01923 998 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 488 672 IPR003594 -
Bma14g01923 998 ProSiteProfiles Histidine kinase domain profile. 383 675 IPR005467 -
Bma14g01923 998 SUPERFAMILY CheY-like 695 839 IPR011006 -
Bma14g01923 998 SMART CHASE_2 103 288 IPR006189 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02184 Bma-Chr1:78756518 Bma14g01923 Bma-Chr14:41020093 1.02E-15 dispersed
Bma05g01135 Bma-Chr5:50403104 Bma14g01923 Bma-Chr14:41020093 0 dispersed
Bma10g00953 Bma-Chr10:20602754 Bma14g01923 Bma-Chr14:41020093 1.90E-14 dispersed
Bma12g00867 Bma-Chr12:39647127 Bma14g01923 Bma-Chr14:41020093 2.70E-20 dispersed
Bma14g00963 Bma-Chr14:10979022 Bma14g01923 Bma-Chr14:41020093 8.85E-07 dispersed
Bma14g01230 Bma-Chr14:19681449 Bma14g01923 Bma-Chr14:41020093 7.23E-10 dispersed
Bma14g01923 Bma-Chr14:41020093 Bma04g00854 Bma-Chr4:10775691 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58427 PF02518 HATPase_c 1.70E-29 CL0025 Bma TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g01923 K14489 - tcc:18610010 1551.95