Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g01932 GGACAGAAATTGAGAATGTCTTCGGAAGCATCGCCGACGTCCACGACGGCGCCGGAACCTCATGCGCCGCTACTCCGGCCTCGCCAGCCTTCTAGCTCCGAAGGTCCCAGCTCACCGGCCCGACCAGCCACCCTCGCTTTCCTACTTGGTCGAGCCACAGGTCACCGAGGTCCCTCCATGATGGTCCGTGAGACAGCGGCTAGGCAGCTCGAGGAACGGCGAGCCGACTGGGGCTATTCCAAACCGGTGGTGGTGCTGGACATATTGTGGAACACGGCGTTTGTTGTTGTGACCGTTGCTATGTTGATTTGCACTAAGAACGAGCGCGCTTGCACGCCGATTCGGCTATGGATCTGTGGCTACGCTTTGCAGTGCGTGGTTCATGTGGTGCTTGTGTGGTTAGAGTACAGAAGGAGGACCGTTAGGCGAGTTAGGGATTTGGAGCGGGAGCAGCAGAGCGCAGATGCTGCGAATGAAAGCGCGGATGAGGATTCTGGAGAGAGGGGTTTGGCTAGTTTGAACCATGTCATCAAACGATGTGAATCAGTAAATACGATGGCATCATTTCTCTGGTGGATAGTTGGCTTCTATTGGGTTGTCTCTGGCGGTGATAATCTTCTGCGAAATGCTCCGCAGTTGTACTGGTTGGCTGTGGTCTTCCTGGCATTTGATGTGTTTTTTGCCGTCTTTTGTGTTGTTTTGGCATGTTTGATTGGGATTGCTCTTTGCTGCTGCTTGCCTTGCATCATTGCCGTACTCTATGCTGTTGCAGGGCAGGAAGGTGCATCAGAAGCAGATCTTAGTATCCTTCCAAAATACAGATTTCAAGCTTTCAATGAAGAAGAGAAGACCAATGTGGGGGCTGGTTTAATGATTCCTGTGGAAACCAGCAGTGGATACTTAGCGACCGAGAAAACACTTTTACCTGAGGATTCAGAGTGTTGTATATGTTTGAGTTCATACGAGGATGGAGCAGAGCTGAATGCTCTTCCCTGCAGCCACCATTTCCACTCTGCATGCATCATAAAATGGCTGAAAATGAATGCAACATGTCCTCTCTGCAAATACAACATTCTCAAAGGCTGTGAGCAGGTATAA 1098 50.82 GQKLRMSSEASPTSTTAPEPHAPLLRPRQPSSSEGPSSPARPATLAFLLGRATGHRGPSMMVRETAARQLEERRADWGYSKPVVVLDILWNTAFVVVTVAMLICTKNERACTPIRLWICGYALQCVVHVVLVWLEYRRRTVRRVRDLEREQQSADAANESADEDSGERGLASLNHVIKRCESVNTMASFLWWIVGFYWVVSGGDNLLRNAPQLYWLAVVFLAFDVFFAVFCVVLACLIGIALCCCLPCIIAVLYAVAGQEGASEADLSILPKYRFQAFNEEEKTNVGAGLMIPVETSSGYLATEKTLLPEDSECCICLSSYEDGAELNALPCSHHFHSACIIKWLKMNATCPLCKYNILKGCEQV 365
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 41238035 41241073 + Bma012724.1 Bma14g01932 95913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g01932 365 MobiDBLite consensus disorder prediction 1 40 - -
Bma14g01932 365 SUPERFAMILY RING/U-box 302 359 - -
Bma14g01932 365 Coils Coil 144 164 - -
Bma14g01932 365 CDD RING-H2_PA-TM-RING 313 355 - -
Bma14g01932 365 SMART ring_2 314 354 IPR001841 -
Bma14g01932 365 Pfam Ring finger domain 313 355 IPR001841 -
Bma14g01932 365 ProSiteProfiles Zinc finger RING-type profile. 314 355 IPR001841 -
Bma14g01932 365 PANTHER E3 UBIQUITIN PROTEIN LIGASE RIE1-LIKE 19 362 - -
Bma14g01932 365 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 294 361 IPR013083 -
Bma14g01932 365 MobiDBLite consensus disorder prediction 1 18 - -
Bma14g01932 365 PANTHER TARGET OF ERK KINASE MPK-1 19 362 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma14g01932 Bma15g00027 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g00809 Bma-Chr5:45420274 Bma14g01932 Bma-Chr14:41238035 2.05E-107 dispersed
Bma12g00096 Bma-Chr12:1629114 Bma14g01932 Bma-Chr14:41238035 3.20E-114 dispersed
Bma14g01932 Bma-Chr14:41238035 Bma15g00389 Bma-Chr15:4321863 2.95E-32 dispersed
Bma14g01932 Bma-Chr14:41238035 Bma15g00027 Bma-Chr15:285755 2.21E-65 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g01932 - K13148 tcc:18609876 519.235