Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g01967 ATGGGTTACAGGCATTTTGACACAGCAAAGATTTATGGGTCTGAACAAGCTCTTGGAAAGTCATTAATGGCGGCAGTTCATAATCACACTGTGGAGAGAGAAGACATTTTTGTTACCTCTAAGCTTTGGGGAAGTGACCACCACGATCCTGTTTCAGCTCTCAACCAAACTCTACAGAATTTAGGGATGGAATATGTGGACTTGTACTTGGTGCATTGGCCAGTAAAATTGAAGCCATGGGTGAACTATGCAGTGCCAAAAGAGGAAGATTTTGAGAAATTAGACCTTGAAAACACTTGGAATGGAATGGAGAAGTGCTTGGATTTGGGTTTGTGTAGAAGTATTGGTGTTAGCAATTTCTCCTCCAAGAAAATTCAATACCTTCTGGAATTTGCTTCCACACCTCCTGCAGTCAATCAAGTGGAGATGCATCCAATGTGGAGGCAGACAAAGCTTAGAGAATTTTGTGCAGACAACAAAATTCATGTGAGTGCTTATTCACCAATTGGCGGAGCAGGAAATTCATGGGGATCAACGGCTGTGATTAATCATCCTACCATTCAATCCATCGCTCTCAAACGCAAAGCTACGCCGGCCCAGGTTGCACTCAAATGGGGAATGTTAAAAGGATCAAGTGTGGTGGTCAAGAGCTTCAATCAACAAAGGATGAAGGAAAACATCCAAGCCGTCAATATCGAATTAGATGGTCGAGATATCTTCAAAATCGAAAAGTTGGAAGAGTGGAAAATCATGAGGGGAGAATTTCTAGTAAATGAAACTACAAGTCCATATAAGACAATCCAAGATCTCTGGGATGATGAAATTTGA 828 41.55 MGYRHFDTAKIYGSEQALGKSLMAAVHNHTVEREDIFVTSKLWGSDHHDPVSALNQTLQNLGMEYVDLYLVHWPVKLKPWVNYAVPKEEDFEKLDLENTWNGMEKCLDLGLCRSIGVSNFSSKKIQYLLEFASTPPAVNQVEMHPMWRQTKLREFCADNKIHVSAYSPIGGAGNSWGSTAVINHPTIQSIALKRKATPAQVALKWGMLKGSSVVVKSFNQQRMKENIQAVNIELDGRDIFKIEKLEEWKIMRGEFLVNETTSPYKTIQDLWDDEI 275
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 42560430 42562311 + Bma012775.1 Bma14g01967 95948

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g01967 275 Pfam Aldo/keto reductase family 2 246 IPR023210 -
Bma14g01967 275 ProSitePatterns Aldo/keto reductase family putative active site signature. 214 229 IPR018170 GO:0016491
Bma14g01967 275 PANTHER - 1 274 - -
Bma14g01967 275 Gene3D - 1 275 IPR036812 -
Bma14g01967 275 SUPERFAMILY NAD(P)-linked oxidoreductase 1 245 IPR036812 -
Bma14g01967 275 ProSitePatterns Aldo/keto reductase family signature 1. 2 19 IPR018170 GO:0016491
Bma14g01967 275 ProSitePatterns Aldo/keto reductase family signature 2. 103 120 IPR018170 GO:0016491
Bma14g01967 275 PANTHER ALDO/KETO REDUCTASE 1 274 - -
Bma14g01967 275 PIRSF AKR 1 269 IPR020471 GO:0016491
Bma14g01967 275 PRINTS Aldo-keto reductase signature 56 74 IPR020471 GO:0016491
Bma14g01967 275 PRINTS Aldo-keto reductase signature 103 120 IPR020471 GO:0016491
Bma14g01967 275 PRINTS Aldo-keto reductase signature 137 166 IPR020471 GO:0016491
Bma14g01967 275 PRINTS Aldo-keto reductase signature 181 205 IPR020471 GO:0016491
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g01967 - - K00002 gmx:100786497 461.455
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma14g01895 Bma-Chr14:40527466 Bma14g01967 Bma-Chr14:42560430 3.35E-76 dispersed
Bma14g01967 Bma-Chr14:42560430 Bma14g00188 Bma-Chr14:2421495 2.62E-11 dispersed
Bma14g01967 Bma-Chr14:42560430 Bma08g00453 Bma-Chr8:18354220 9.37E-45 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g558 . . . . . . Bma14g01967 . . . . Cma04g00024 . Car04g00033 . . . Bhi07g00153 . . . Hepe01g0358 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003177 1 1 1 1 1 2 1 1 2 1 2 2 1 2 2 1 2 1 1 2 2 2 1 1 1 3 1 3 2 6 50
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bma14g01967 Bma_Chr14 FPKM 9.802125 12.444656 13.538388 16.480124 61.865898 47.516365 57.869213 2.699401 3.449689 3.028557