Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g01968 ATGAAACTTCCTTTCCCTTTCTGTATCACTATCTTCTTCTTCTTCTTCCTCCAGACAACCCTAGTTTTCTCTGCAACAAATCTTCCGTTTCCGCTTGTCGCTTTGCTTTCTCTTAAATCTTCTCTCAGAGATCCTCAATCTTATCTCCATGACTGGGACCCTGAGTCTGATTTTCACGACCCTGTTTGGTGTACATGGTCTGGCATTAAATGCCGTCCAAACACAACACAGATCACAAAACTAGACCTCTCTAGCCGAAATCTTTCCGGGATTATCCCTCCTGAGATCCAGTACTTGTCAAACTTAGTCCACTTGAATTTGAGTGGAAACAACTTTAATGGGCCTCTTCAAGCCGCCATTTTTGAGCTCAGCGAGCTTAGGACCCTTGATATTAGCCATAACAACTTCAATTCAACTTTCCCACCGGGGATTTCCAAGCTCGAGTTCTTGAGGAACTTCAGTGCTTACAGCAACAGCTTTGTCGGTCCACTGCCACAAGAACTTATTCGGCTTCGATATCTTGAGCTCCTCAACCTCGGCGGAAGCTACTTTGACGGTGCTATTCCGACGAGTTATGGCCGTTTTCCCAGATTAAAGTTCATGTACTTGGCTGGAAATAATTTGCAAGGATCAATACCTCCACAACTAGGATTCTTATCCCACCTAGAGCGCATGGAAATCGGATACAACTCGTTTTCTGGTTTTGTACCATCAGAATTTTCTTTGTTGATGATGTTAAAATACTTGGACATTGCTTCAGCTAATCTTTCAGGCAATTTACCTCAAGATCTTGGAAATTTAACTTCACTGGAGACACTTTTGCTGTTCAAGAACCAATTTACAGGCGAAATCCCTGACAGTTTTGGTAATTTGAAGGCTTTAAAAGTGCTTGATTTGTCTGATAATCAACTTTCTGGAGCAATTCCTGAAGAATTGAGTAATTTAAACGAGCTAATACAGTTGAGCTTGATGAACAATAATCTGAGTGGAGAAATTCCACTTCCAGTCGCTGAGCTTCCCAACCTCGACACTTTACTCCTATGGAACAATTCTCTAGAAGGAATTCTACCTCAGAAACTCGGCACCAACGGTAAATTACAGAAACTAGATGTCTCTTCAAACTTTCTCACCGGTCCGATACCCCAGAATCTCTGCCACGGAAACAAGCTTTTCAAGCTTATCCTCTTCTCCAACATGTTTGTCAATGGCCTCCCACGCTCCCTAGCAAACTGCAGTTCTTTATCGCGCTTTCGAATCCAAAACAACCAACTCAACGGCTCCATCCCTTCTGGTTTCGGCCTCTTACCAAACCTGACGTTCATCGACATGAGCAACAACAATTTGTCAGGAGAAATTCCTCAAGATTTTTCCAATGCTGTCAAATTGGAGTACTTAAACATATCTAGAAACTCTCTCAACACTTCCTTACCGGAAAACATCTGGAATTCCTCTAGCTTGCAGATTTTTTCGGCTAGCTCGGCTCAAATTACCGGAAGAATCCCCGAATTCTTCGGTTGCAGAAGCGTTTACAAAATCGAACTGCAAGGCAATTTCTTGAACAGTAGCATACCTTGGACTATAGGCCACTGCGAGAAACTTCTGAGCTTGAACTTGAGCAGAAATTCACTTTCCGGCATTATACCATGGGAGATCTCCACTCTTCCTTTCATCAGCACCATCGATTTGTCGCACAATTTCCTTACCGGTTCGATCCCTTCCAATTTTCAAAACTGTAGCACTCTCGAAATTTTTAACGTTTCCTACAATTTGCTGACCGGCCCAGTTCCCTCCTCCGGCCTCGTCTTCCCCAATTTGCACCCATCTTCATTCTTTGGCAATGAGGCTCTGTGCGGCGCCGTTTTGGCAAAACCATGTAGGACTGGGATTGCTGACGGGGCAATTGAATTGCATCCAGGTCAGCCACATCGGACAGCTGGTGCGATCGTGTGGATAATGGCAGCCGCATTCGGCATCGGGTTGTTTTTACTCGTGGCAGGGACCAGATGCTTCCAGGCAAATTATAGCAATCGATTTAGAAATGATCCCGAGACTGCCCAGTGGAAACTAACTGCTTTCCAACGGTTGAATTTTACGGTGGATGATGTGTTGGAGTGCTTGTCAATGACGGATAAGATCATAGGAATGGGGTCCACAGGCACCGTGTACAAGGCGGAGATGCCAGGTGGTGAGATCATAGCAGTGAAAGAGTTACGAGGGAAGCATAAAGATCAGATCGGACGGCCGAGAGGGTTTTTGGCGGAAGTGGATGTTATGGGGAACGTGAGGCATAGGAACATAGTGAGATTGTTAGGGTGCTGCAGCAACGAGGACTGCACCATGCTGCTCTACGAATACATGCCCAATGGTAACTTAGAAGATTTATTGCACAACAAAAACAAGGATGAAAATTTGATCGCCGATTGGGCGACGAGGTACAAAATAGCCTTGGGAGTGGCTCAGGGAATTTGCTATCTTCACCACGATTGCGACCCCGTCATCGTTCATCGCGATCTGAAGTCGAGTAACATTTTGTTGGACGGTGAGATGGAGGCTAGAGTTGCTGATTTCGGAGTGGCAAAGTTGATTGAGGGCCATGAAACGATGTCCGTGATCGCCGGGTCCTATGGTTACATTGCCCCAGAATATGCTTACACTCTCCAAGTAGATGAGAGAAGCGACATATATAGTTACGGCGTCGTTTTAATGGAGATTTTGACCGGGAAAAGGTCTGTTCATTCGGAATTCGGGGACGGAAACAACATCGTCGATTGGGTGAGGTCGAAAATCAATGCCAAGAATGGCATTATCGAAATTTTGGACAAGAACGCTGGAGCTTCTTGTTCGTCGGTTCGGGAAGAAATGATTCAAATGCTTAGAATTGCGTTGCTTTGTACCAGCCGAAATCCGGCGGACCGACCTTCGATGAGGGACGTCATTTTGATGCTGGAGGAGGCAAAGCCAAAGAGGAAGATGCCGGAAGGCGACAGAGTGAATGTAATAAGTGGTCGCCGGGGAAGCAGCGATGGGGATGTTCTGTTGACGCAGTAG 3048 45.54 MKLPFPFCITIFFFFFLQTTLVFSATNLPFPLVALLSLKSSLRDPQSYLHDWDPESDFHDPVWCTWSGIKCRPNTTQITKLDLSSRNLSGIIPPEIQYLSNLVHLNLSGNNFNGPLQAAIFELSELRTLDISHNNFNSTFPPGISKLEFLRNFSAYSNSFVGPLPQELIRLRYLELLNLGGSYFDGAIPTSYGRFPRLKFMYLAGNNLQGSIPPQLGFLSHLERMEIGYNSFSGFVPSEFSLLMMLKYLDIASANLSGNLPQDLGNLTSLETLLLFKNQFTGEIPDSFGNLKALKVLDLSDNQLSGAIPEELSNLNELIQLSLMNNNLSGEIPLPVAELPNLDTLLLWNNSLEGILPQKLGTNGKLQKLDVSSNFLTGPIPQNLCHGNKLFKLILFSNMFVNGLPRSLANCSSLSRFRIQNNQLNGSIPSGFGLLPNLTFIDMSNNNLSGEIPQDFSNAVKLEYLNISRNSLNTSLPENIWNSSSLQIFSASSAQITGRIPEFFGCRSVYKIELQGNFLNSSIPWTIGHCEKLLSLNLSRNSLSGIIPWEISTLPFISTIDLSHNFLTGSIPSNFQNCSTLEIFNVSYNLLTGPVPSSGLVFPNLHPSSFFGNEALCGAVLAKPCRTGIADGAIELHPGQPHRTAGAIVWIMAAAFGIGLFLLVAGTRCFQANYSNRFRNDPETAQWKLTAFQRLNFTVDDVLECLSMTDKIIGMGSTGTVYKAEMPGGEIIAVKELRGKHKDQIGRPRGFLAEVDVMGNVRHRNIVRLLGCCSNEDCTMLLYEYMPNGNLEDLLHNKNKDENLIADWATRYKIALGVAQGICYLHHDCDPVIVHRDLKSSNILLDGEMEARVADFGVAKLIEGHETMSVIAGSYGYIAPEYAYTLQVDERSDIYSYGVVLMEILTGKRSVHSEFGDGNNIVDWVRSKINAKNGIIEILDKNAGASCSSVREEMIQMLRIALLCTSRNPADRPSMRDVILMLEEAKPKRKMPEGDRVNVISGRRGSSDGDVLLTQ 1015
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
14 42581795 42585098 - Bma012776.1 Bma14g01968 95949
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bma14g01968 1015 Pfam Leucine rich repeat N-terminal domain 34 71 IPR013210 -
Bma14g01968 1015 Pfam Protein kinase domain 710 978 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma14g01968 1015 ProSitePatterns Serine/Threonine protein kinases active-site signature. 833 845 IPR008271 GO:0004672|GO:0006468
Bma14g01968 1015 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE TDR ISOFORM X3 7 994 - -
Bma14g01968 1015 Gene3D Ribonuclease Inhibitor 283 387 IPR032675 -
Bma14g01968 1015 SUPERFAMILY Protein kinase-like (PK-like) 710 983 IPR011009 -
Bma14g01968 1015 Pfam Leucine Rich Repeat 559 578 IPR001611 GO:0005515
Bma14g01968 1015 Pfam Leucine Rich Repeat 437 458 IPR001611 GO:0005515
Bma14g01968 1015 Pfam Leucine Rich Repeat 365 386 IPR001611 GO:0005515
Bma14g01968 1015 Pfam Leucine Rich Repeat 532 553 IPR001611 GO:0005515
Bma14g01968 1015 SMART LRR_typ_2 267 290 IPR003591 -
Bma14g01968 1015 SMART LRR_typ_2 554 577 IPR003591 -
Bma14g01968 1015 SMART LRR_typ_2 195 219 IPR003591 -
Bma14g01968 1015 SMART LRR_typ_2 339 363 IPR003591 -
Bma14g01968 1015 SMART LRR_typ_2 460 483 IPR003591 -
Bma14g01968 1015 SMART LRR_typ_2 291 315 IPR003591 -
Bma14g01968 1015 SMART LRR_typ_2 123 147 IPR003591 -
Bma14g01968 1015 SMART LRR_typ_2 435 458 IPR003591 -
Bma14g01968 1015 SUPERFAMILY Outer arm dynein light chain 1 441 611 - -
Bma14g01968 1015 ProSiteProfiles Protein kinase domain profile. 707 989 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma14g01968 1015 Gene3D Ribonuclease Inhibitor 181 282 IPR032675 -
Bma14g01968 1015 Gene3D Ribonuclease Inhibitor 505 626 IPR032675 -
Bma14g01968 1015 Gene3D Phosphorylase Kinase; domain 1 671 785 - -
Bma14g01968 1015 SUPERFAMILY L domain-like 158 500 - -
Bma14g01968 1015 Gene3D Ribonuclease Inhibitor 388 456 IPR032675 -
Bma14g01968 1015 Gene3D Ribonuclease Inhibitor 457 504 IPR032675 -
Bma14g01968 1015 Gene3D Transferase(Phosphotransferase) domain 1 786 1002 - -
Bma14g01968 1015 Gene3D Ribonuclease Inhibitor 32 180 IPR032675 -
Bma14g01968 1015 PRINTS Leucine-rich repeat signature 294 307 - -
Bma14g01968 1015 PRINTS Leucine-rich repeat signature 435 448 - -
Bma14g01968 1015 ProSitePatterns Protein kinases ATP-binding region signature. 713 735 IPR017441 GO:0005524
Bma14g01968 1015 SMART serkin_6 707 982 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma14g01968 1015 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 7 994 - -
Bma14g01968 1015 MobiDBLite consensus disorder prediction 991 1015 - -
Bma14g01968 1015 SUPERFAMILY L domain-like 72 163 - -
Bma14g01968 1015 Pfam Leucine rich repeat 77 136 IPR001611 GO:0005515
Bma14g01968 1015 Pfam Leucine rich repeat 269 328 IPR001611 GO:0005515
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00291 Bma-Chr1:2423821 Bma14g01968 Bma-Chr14:42581795 0 dispersed
Bma10g01139 Bma-Chr10:38697054 Bma14g01968 Bma-Chr14:42581795 5.68E-36 dispersed
Bma13g00425 Bma-Chr13:7788769 Bma14g01968 Bma-Chr14:42581795 0 dispersed
Bma14g01968 Bma-Chr14:42581795 Bma15g01094 Bma-Chr15:43526502 0 dispersed
Bma15g00826 Bma-Chr15:20290663 Bma14g01968 Bma-Chr14:42581795 1.09E-31 dispersed
Bma15g01096 Bma-Chr15:43629790 Bma14g01968 Bma-Chr14:42581795 0 dispersed
Bma14g01968 Bma-Chr14:42581795 Bma09g00155 Bma-Chr9:5397708 0 transposed
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66924 PF00069 Pkinase 2.00E-48 CL0016 Bma PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g01968 - - tcc:18605335 1488.01