Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g01999 ATGGTATGCAGCAGTGGCATACGGAGTGTCATTACTCAAGCGGGACGTCTAGGAATATTCTTGAAGAGGCCGGTCCAACTCAGCAATATCCACAAAAATCTTTCCTCGGAACTTTGCTTCACAAACTTGTTTAGGCATGAATTCAGAACAAGTTTAAGGATGATGGTGGATGCAGGAGCAATGGAAAAATGCGGACCAATGGTTGGTATGTTTACACAGAAAGAACTAGATGGTGGATGTGTCAGCGGAAGTTTGAAAAGTGAAGATGGAAAATTTAGCTGTGGGTATTCAAGCTTCAGAGGGAAGAGGGCAACAATGGAGGATTGTTTTGACATTAAAATGTCAACAATAGATGGGCAGAGAGTCTGCCTCTTTGGCATATTTGATGGTCATGGTGGATCACGAGCGGCTGAGTATTTGAAGGAGCATCTCTTTGAGAATCTCATGAAGCATCCATTATTCTTGACTGATACTAAATCAGCTATTAGTGCGTTATACTTCTCTTACTTGTATTCTAGAGGGCCGCTTAGTTATATTTTGGGAAACTGCTCCATTTTTTACATGGTTCTCAAATTCTATAATCTTTCAGGCAAAACATATCAACAGACAGATTCAGATTTTTTGGACTCTGAAAAAGATATTTACCGTGATGATGGTTCTACTGCTTCAACTGCAGTATTGATTGGAAATCATCTGTATGTTGCCAATGTTGGAGACTCACGCACTGTTATATCAAAAGGAGGCAGAGCCTGCTGTTTTTTGTTGACAGCAATCGCACTCTCAAAGGATCATAAACCCAATAGAACTGATGAGAGGCAGAGAATTGAGAATGCAGGGGGAGTCGTGATGTGGGCAGGTACTTGGAGGGTAGGAGGTGTGTTAGCTATGTCGCGTGCATTTGGAAACCGGATGTTGAAGCAATTTGTTGTGGCCGACCCAGAGATTCAGGATGAGGAAATTGATGCAGATTTCGAATTACTTGTTCTGGCAAGTGATGGTTTGTGGGACACCAGGTGTGCTGTGCAGGATGCAATATCGCTTGCGCTCACAGAAGACGAAGCAGAGGAAGCAGCCCGAAAGCTAACGGAAGCAGCCTTCACCCGTGGGAGTGCTGACAACATAACATGCATTGTGGTAAGGCTCCACCATGACAAACAACCCCCATCAACTCCTCAAAATGAATAA 1185 43.38 MVCSSGIRSVITQAGRLGIFLKRPVQLSNIHKNLSSELCFTNLFRHEFRTSLRMMVDAGAMEKCGPMVGMFTQKELDGGCVSGSLKSEDGKFSCGYSSFRGKRATMEDCFDIKMSTIDGQRVCLFGIFDGHGGSRAAEYLKEHLFENLMKHPLFLTDTKSAISALYFSYLYSRGPLSYILGNCSIFYMVLKFYNLSGKTYQQTDSDFLDSEKDIYRDDGSTASTAVLIGNHLYVANVGDSRTVISKGGRACCFLLTAIALSKDHKPNRTDERQRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQFVVADPEIQDEEIDADFELLVLASDGLWDTRCAVQDAISLALTEDEAEEAARKLTEAAFTRGSADNITCIVVRLHHDKQPPSTPQNE 394
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 43298404 43302035 - Bma012808.1 Bma14g01999 95980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g01999 394 Pfam Protein phosphatase 2C 94 374 IPR001932 -
Bma14g01999 394 Gene3D - 81 388 IPR036457 -
Bma14g01999 394 PANTHER ALPHABET, ISOFORM E-RELATED 198 389 - -
Bma14g01999 394 ProSiteProfiles PPM-type phosphatase domain profile. 93 381 IPR001932 -
Bma14g01999 394 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 45 166 - -
Bma14g01999 394 PANTHER ALPHABET, ISOFORM E-RELATED 45 166 - -
Bma14g01999 394 SMART PP2C_4 83 379 IPR001932 -
Bma14g01999 394 CDD PP2Cc 92 381 IPR001932 -
Bma14g01999 394 SUPERFAMILY PP2C-like 88 382 IPR036457 -
Bma14g01999 394 ProSitePatterns PPM-type phosphatase domain signature. 124 132 IPR000222 GO:0043169
Bma14g01999 394 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 198 389 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g00107 Bma-Chr4:839888 Bma14g01999 Bma-Chr14:43298404 4.39E-102 dispersed
Bma14g01999 Bma-Chr14:43298404 Bma05g00569 Bma-Chr5:33234728 6.12E-49 dispersed
Bma14g01999 Bma-Chr14:43298404 Bma01g02182 Bma-Chr1:78713791 3.83E-106 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g01999 K17506 - zju:107414609 497.278