Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma14g02004 | ATGTCCTCCACGCTGCTCGAGGTGACGCGCGCAGCGCATGAGGAGGTGGAGCGCTTGGAGCGAAACGTGGTGAAGGAGCTCCAGAATGATCCTGCTTCTAGTCGGGATCGCTTGCTTCAGAGCCATCGTGTGCGGAGTATGATAGACACTATCACTTCTACTACTGAGAAACTTGTTGAGATATATGAGGATAAAGATAATGCGAGAAAGGATGAGATAGGAGCCCTTGGGGGCCAAACTGCAACTGGAACCAACGTGTTTAGTGCATTTTATGATAGGTTGAAGGAGATTCGTGAGTACCACAGAAGGCATCCTGCTGCACGTGTTGTTGATTCAAATGACGATTATGAGATGCAACCTAAAGAGGAGCCACAAACTGAATTCAGCGGAGAGGAAGGATTTGGACGGTATCTTGACTTGCATGAATTGTACAACGAGTACATCAATTCTAAGTTCGGAGAGCCAATTGAGTATTCTGCTTACCTTGATTTGTTTTCTCAGCCACATAAGATTCCCAATAAACTAAAGTCAACCAACAAATATAAAGATTATGTGGCGAATCTACTCGAGTATTTAATATACTTTTTCCACCGTACTGAGCCTTTGCAAGATCTTGATAAAATATTTTCCAAGGTTGAAACTGAATTTGATGACCGATGGGTGAATGGCACAGTGGAGGGGTGGGAGAGTGCTAGTCAAGAAAATGGAAAAATAGCTCAACATACTGTTATTGATCTTGACTATTACAGCACGATCGACGAGCTGATTGAATTAGGTCCTGAAAAGCTGAAGGAGGCACTGGCTGCATTGGGACTGAAGACAGGTGGTACTGTCCAGCAGCGAGCAGAGAGGCTTTTCCTTACTAAGCATACCGCTCTTGAAATGTTGGATAAGAAACATTTTGCTAAAGTTCCCCGTGGTTCAGAACAAAATGGAGTTCCTGTGGCTTCACATTGTAATGAAAATTTGAAAGAAGTTGCCTTGATGGAAGCCAAAATTGAAAAACTAAGTGACTTATTGGATGAGACAATTGAGCGAACAAAGGACAACATCATGAAAAAGCAATCATTAACATATGAGGAAATTGAAGCAGAACGTGAGGAGGAAGAGACGCAGGCTGACACAGATACTGATGATGAGGAGCAACAAATTTATAATCCTCTGAAACTTCCAATGGGTTGGGATGGGAAACCTATACCTTATTGGCTGTACAAACTTCACGGTCTTGGTCAGGAGTTTAAATGTGAGATATGTGGGAACTATAGCTACTGGGGCCGTAGAGCTTTTGAACGACATTTCAAAGAATGGCGTCACCAGCATGGAATGCGTTGCCTTGGTATTCCAAATACAAAGAACTTCAATGAAGTAACATCAATTGAGGAAGCGAAAGACTTGTGGAAGAAAATACAAGAGCGGCAAGGAGTGAACAAATGGCGGCCAGATCTTGAAGAAGAGTATGAAGATAAAGAGGGTAACATCTACAACAAAAAGACTTTACTGATCTCCAGCGCCAGGGATTGA | 1521 | 42.87 | MSSTLLEVTRAAHEEVERLERNVVKELQNDPASSRDRLLQSHRVRSMIDTITSTTEKLVEIYEDKDNARKDEIGALGGQTATGTNVFSAFYDRLKEIREYHRRHPAARVVDSNDDYEMQPKEEPQTEFSGEEGFGRYLDLHELYNEYINSKFGEPIEYSAYLDLFSQPHKIPNKLKSTNKYKDYVANLLEYLIYFFHRTEPLQDLDKIFSKVETEFDDRWVNGTVEGWESASQENGKIAQHTVIDLDYYSTIDELIELGPEKLKEALAALGLKTGGTVQQRAERLFLTKHTALEMLDKKHFAKVPRGSEQNGVPVASHCNENLKEVALMEAKIEKLSDLLDETIERTKDNIMKKQSLTYEEIEAEREEEETQADTDTDDEEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEVTSIEEAKDLWKKIQERQGVNKWRPDLEEEYEDKEGNIYNKKTLLISSARD | 506 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 43443057 | 43449102 | + | Bma012813.1 | Bma14g02004 | 95985 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma14g02004 | 506 | Coils | Coil | 352 | 379 | - | - | |
Bma14g02004 | 506 | Coils | Coil | 9 | 29 | - | - | |
Bma14g02004 | 506 | MobiDBLite | consensus disorder prediction | 359 | 381 | - | - | |
Bma14g02004 | 506 | MobiDBLite | consensus disorder prediction | 362 | 381 | - | - | |
Bma14g02004 | 506 | Pfam | Replication stress response SDE2 C-terminal | 224 | 303 | - | - | |
Bma14g02004 | 506 | ProSiteProfiles | Zinc finger matrin-type profile. | 413 | 444 | IPR000690 | GO:0003676|GO:0005634|GO:0008270 | |
Bma14g02004 | 506 | Pfam | Splicing factor SF3a60 binding domain | 80 | 105 | IPR021966 | - | |
Bma14g02004 | 506 | Pfam | Pre-mRNA-splicing factor SF3A3, of SF3a complex, Prp9 | 127 | 174 | IPR031774 | - | |
Bma14g02004 | 506 | Pfam | SF3a60/Prp9 C-terminal | 389 | 498 | IPR024598 | GO:0000398|GO:0003723|GO:0005681 | |
Bma14g02004 | 506 | PANTHER | SPLICING FACTOR SF3A-RELATED | 1 | 499 | - | - | |
Bma14g02004 | 506 | PANTHER | BNAA03G01920D PROTEIN | 1 | 499 | - | - | |
Bma14g02004 | 506 | Coils | Coil | 326 | 346 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma02g01098 | Bma-Chr2:52673802 | Bma14g02004 | Bma-Chr14:43443057 | 5.46E-09 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma14g02004 | K12827 | - | zju:107414800 | 811.601 |