Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g02020 ATGGAGATGTTCTACTACCTTGTGTTCGGGGCATTGGCAGCGGTGGTGGCAGCTCTGGAGCTCAGCAAAACCAACAAAGACCGAATCAACACTTCTTCAGCTTTCAACTCTTTCAAGAACAATTACCTTCTCGTTTACTCTCTCATGATGGCTGGGGACTGGTTGCAGGGCCCTTACGTGTATTTTCTTTACAAGCAGTATGGTTTTAATAAAGGAGATATTGGGCAGCTATTTATTGCTGGGTTTGGATCTTCTATGTTGTTTGGGACAATCGTCGGCTCCCTTGCTGACAAACAAGGGCGAAAAAGAGCTTGTGTGACGTACTGTATAACTTATATTCTAAGTTGTATAACCAAGCATTCTCCTGAATACAAAGTTTTAATGGTGGGCCGGGTTTTGGGAGGTATTGCCACTTCCCTCCTGTTTTCAGCGTTTGAGTCATGGCTGGTTGCAGAACACAACAAAAGGGCCTTTGACCAACAATGGCTTTCAATAACTTTCTCAAAGGCAATTTTCCTTGGAAATGGTCTTGTGGCTATCTTGGCTGGGTTGTTTGGTAATGTACTCGTTGACACACTGGCTCTTGGGCCTGTAGCGCCCTTTGATGCTGCTTCTTGCTTTCTTGCAATTGGCATGGCCGTAATTTTATCATCATGGACTGAGAACTACGGAGATCCTTCTGAAAGTAAAGACTTGCTTACCCAGTTCAGGGGTGCAGCTGTGGCCATTGCTTCTGATGAGAAAATAGCTCTTCTTGGTGCCATTCAGTCTCTTTTTGAAGGTTCTATGTATACCTTTGTGTTTCTTTGGACTCCTGCTCTGAGCCCAAATGATGAGATCATTCCGCATGGTCTTATATTTGCAACATTTATGCTGTCCTCAATGCTGGGAAGCTCCCTAGCATCTAGGTTAATGACCCGCTCATCACCAAGAGTAGAGATCTATATGCAGATTGTTTTTATTATCTCAGCTGCCTCTTTGACTCTTCCAATTCTCACCAACTTCTTGGTAGTTCCAACGAAGGAAAAAGGTGGAAGTATTTCTTTTGCTGGTTGTCTTCAGCTTCTTGGCTTCTGTGCATTTGAGGCTTGTGTGGGTATATTCTGGCCTTCCATTATGAAGATGAGGTCGCAATACATTCCCGAGGAGGCCAGGAGCACAATCATGAATTTCTTTCGGATTCCTCTCAATGTTTTTGTGTGCATTGTGCTGTACAACGTGGATGCGTTCCCCATCACTTTCATGTTTGGAATGTGCTCGTTGTTCCTCTTTTTGGCATCCCTACTGCAGAGGAGGCTAATGACGATTACAGACAAG 1317 44.27 MEMFYYLVFGALAAVVAALELSKTNKDRINTSSAFNSFKNNYLLVYSLMMAGDWLQGPYVYFLYKQYGFNKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCITKHSPEYKVLMVGRVLGGIATSLLFSAFESWLVAEHNKRAFDQQWLSITFSKAIFLGNGLVAILAGLFGNVLVDTLALGPVAPFDAASCFLAIGMAVILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEIIPHGLIFATFMLSSMLGSSLASRLMTRSSPRVEIYMQIVFIISAASLTLPILTNFLVVPTKEKGGSISFAGCLQLLGFCAFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFVCIVLYNVDAFPITFMFGMCSLFLFLASLLQRRLMTITDK 439
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 43561317 43564501 - Bma030757 Bma14g02020 96001

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g02020 439 PANTHER MOLYBDATE-ANION TRANSPORTER 1 438 - -
Bma14g02020 439 CDD MFS_MFSD5_like 35 419 - -
Bma14g02020 439 Gene3D MFS general substrate transporter like domains 42 431 IPR036259 -
Bma14g02020 439 SUPERFAMILY MFS general substrate transporter 42 434 IPR036259 -
Bma14g02020 439 Pfam Sugar-tranasporters, 12 TM 4 358 IPR008509 GO:0015098|GO:0015689|GO:0016021
Bma14g02020 439 PANTHER SAM (S-ADENOSYL METHIONINE) TRANSPORTER 1 438 IPR008509 GO:0015098|GO:0015689|GO:0016021
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g02020 K24175 MFSD5; MFS transporter, MFS domain-containing protein family, molybdate-anion transporter - tcc:18605824 774.622
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bma12g01220 Bma14g02020 CCT
Bma12g01220 Bma14g02020 ECH
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00677 Bma-Chr2:22215892 Bma14g02020 Bma-Chr14:43561317 9.60E-30 transposed
Bma12g01257 Bma-Chr12:45577522 Bma14g02020 Bma-Chr14:43561317 4.71E-30 transposed
Bma15g01121 Bma-Chr15:44583379 Bma14g02020 Bma-Chr14:43561317 4.61E-29 transposed
Bma12g01220 Bma-Chr12:45096301 Bma14g02020 Bma-Chr14:43561317 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi16g998 Blo06g01055 Blo15g00079 . Bda07g01948 . Bpe07g01025 . Bma14g02020 . . . Cma15g01012 Car02g00941 Car15g00946 . Cpe05g00586 . . . . . . . . Cla01g00026 Cam01g0025 Cec01g0023 Cco01g0026 Clacu01g0026 Cmu01g0025 Cre09g2482 Cone1ag1005 Cone5ag0713 Cone14ag0001 Cone15ag0002 . . . . . Blo09g00012 Bda06g00794 Bda15g00793 . Bpe12g00341 . Bma12g01220 . Cmo02g01168 . . . . . . Cpe13g00324 Bhi12g00679 . . . Hepe06g0814 . . . . . . . . . Lsi09g00006 . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001828 3 2 3 2 2 2 3 2 2 2 2 2 2 2 2 2 2 3 3 2 2 2 2 2 2 2 2 3 3 2 67
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bma14g02020 Bma_Chr14 FPKM 0.492686 0.0 1.352194 0.661667 1.821885 1.843699 2.18239 4.210532 4.083591 4.263447