Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g02036 TTCATGGAAGAAGCACTGGTGCTATACCCTTCTCCAGGGATGGGGCATCTCGTCCCAATGGTTGAGTTGGGCAAGCTTATTCTCAAGCACCATCCTTTCTTCTCCGTCAAAATCCTCATCCTCGATCCTCCTTACTCCACTGGTTCGACCTCCGATTACGTATCCGCCATCTCCGTACCGTCTCTCACCTTCCACCACCTCCCCACTCTCTCTCTCCCTCCTTCTTCCTCTCCTCAAATGGTCGAAGATCTCGCCTACCAGCTTCCTCGCCTCAACAACCCCAATCTCCGTAGAGCACTGGAGAAAATCTCGGAGACTGCCGTCGTTAGAGCTCTGATGATCGATTTTTTCAACGACGTCGCTTTGGAAGTCGCCGGAGATATGAGAATACCCGCTTACTTTTTCTTCACATGCGGCGCCGGAAACCTGGCGCTCTTTCTGTACTTTCCCACTTTACACAAAATCACTACCGAAAATTTCAAAGACGAAAAGGTTGTATTCAACATCCCCGGCACACCTCCAATCCTCTCTTCCGATATGCCGACTCCTTGGCAAATTCGCAACACGAACATCTATAACAGTATGCTTAATACGGCAGTCCAATTTACTAAATCGAGAGGAATTTTGGTGAATACATTTACAGAGCTCGAATCAACAGCTATGGCGGCTTTAACGAACGGAACGTGCGTGATAGACGGTCCTACGCCGCCGATCTTCGTAGTCGGACCAGTGATAGCGAGCAGCAACGGGGGAAAAGAAGAAGAACGACACGAATGCTTGAGGTGGCTGGATTCGCAGCCGAGCAAAAGCGTGGTGTTTCTTTGTTTCGGAAGTATGGGTTTGCATTCGGCGAAGCAGATAAGGGAGATGGCTATGGGGATCGAGAAAAGCGGGCATAGGTTCCTGTGGGTGGTCCGGTCACCGCCGGAAGAAGAAGAAGAAGAAGAAGGGAAGAGCCAGAAGGTAAGGAGGCCAGAGCCGGAGTTGGAGAAACTATTACCGGAGGGATTTCTGTGTCGGACGAAAAGCAGGGGAATGGTGGTCAAGTCGTGGGCTCCGCAGGTGGCGGTGCTGAATCACGATGCCGTCGGTGGCTTTGTCTCCCACTGCGGGTGGAATTCTCTCATTGAAGCCATTTCTGCAGGCGTGCCACTTCTGGCATGGCCACTGTACGCAGAGCAGAGAATGAACAGAATAATTCTGGTGCAGCAGATGAAGATAGGGTTGTCTGTGAACGAGTCAGAAGACGGGTTTGTGACCGCCGCCGAGTTGGAAGAGCGAGTGAGGCAATTGATGGAGACGGAGAGAGGAAGAGAGGTGAGAGAGAGGGTTGAGATGATGAGACATGAAGCTGCTGCAGCAATGGAAGAAGACGGCTCGTCTGTCCTTGCACTGGCTCAGTTGGCTAAGCTGCTGATGAAAGACTCCCAGTTTTAG 1437 51.43 FMEEALVLYPSPGMGHLVPMVELGKLILKHHPFFSVKILILDPPYSTGSTSDYVSAISVPSLTFHHLPTLSLPPSSSPQMVEDLAYQLPRLNNPNLRRALEKISETAVVRALMIDFFNDVALEVAGDMRIPAYFFFTCGAGNLALFLYFPTLHKITTENFKDEKVVFNIPGTPPILSSDMPTPWQIRNTNIYNSMLNTAVQFTKSRGILVNTFTELESTAMAALTNGTCVIDGPTPPIFVVGPVIASSNGGKEEERHECLRWLDSQPSKSVVFLCFGSMGLHSAKQIREMAMGIEKSGHRFLWVVRSPPEEEEEEEGKSQKVRRPEPELEKLLPEGFLCRTKSRGMVVKSWAPQVAVLNHDAVGGFVSHCGWNSLIEAISAGVPLLAWPLYAEQRMNRIILVQQMKIGLSVNESEDGFVTAAELEERVRQLMETERGREVRERVEMMRHEAAAAMEEDGSSVLALAQLAKLLMKDSQF 478
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 43734734 43736268 + Bma012844.1 Bma14g02036 96017

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g02036 478 MobiDBLite consensus disorder prediction 306 326 - -
Bma14g02036 478 ProSitePatterns UDP-glycosyltransferases signature. 351 394 IPR035595 -
Bma14g02036 478 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 6 474 - -
Bma14g02036 478 Gene3D Glycogen Phosphorylase B; 257 456 - -
Bma14g02036 478 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 252 435 IPR002213 GO:0008194
Bma14g02036 478 PANTHER GLYCOSYLTRANSFERASE 2 473 - -
Bma14g02036 478 CDD GT1_Gtf-like 7 454 IPR002213 GO:0008194
Bma14g02036 478 PANTHER GLYCOSYLTRANSFERASE 2 473 - -
Bma14g02036 478 Gene3D Glycogen Phosphorylase B; 7 461 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g02036 - - K12938 vvi:100268157 483.026
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma13g01165 Bma-Chr13:44978652 Bma14g02036 Bma-Chr14:43734734 6.98E-72 dispersed
Bma13g01166 Bma-Chr13:44982599 Bma14g02036 Bma-Chr14:43734734 4.41E-71 dispersed
Bma14g02036 Bma-Chr14:43734734 Bma15g01011 Bma-Chr15:39706813 2.83E-86 dispersed
Bma14g02036 Bma-Chr14:43734734 Bma02g01084 Bma-Chr2:52548940 5.45E-99 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi16g796 . . . . . . . Bma14g02036 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0015390 4 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 1 12
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bma14g02036 Bma_Chr14 FPKM 0.47764 0.0 0.0 0.856902 0.719571 0.0 0.550167 2.151375 1.916545 1.923452