Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g02040 ATGGGCATAGCTCTCCCTCAGTTCCTGCTTAATATCGATGGGGCTTCTGGTGGAATTCTTTTGCTGTGGATTGTTGGTGTTTGCATTCTTTTGCCGCTTGTGATTGCTGTTGTGTATCTTTCAAGGTCGTCAAAATATACCGGAAATTATGTCATGCATCAAACTTTAACCACTTATTATTATTTGATGAAGCCTTCTTTGGCGCCAAGCAAAGTTATGGATGTCTTCATAAAAGCAGCAGAATATTTGGAAATTCCAGTTCGTAGGACTGACAATGAACCTCTCCAGAAGCTCTTCCTGACAGTGAGGAGTGAGTTGAATCTTGACCTCAAGAATATTAAGCAAGAACAAGCAAAGTTTTGGAAACAGCATCCGGGACTAGTCAAGACAGAGTTGTTGATTCAGGCTCATTTAACTCGGGAGTCTGCTGATTTGCCACCATCTTTACAAGTTGATTTCAGACGTGTCCTAGAACTTGCCCCTCGACTTCTTGAAGAATTAATGAAGATGGCACTTATACCACGGAACACTCAAGGTCAAGGATGGCTACGTCCTGCAACTGGGGTGATTGAGCTATCTCAATGCATCATTCAGGCTGTTCCTCTCAATGCAAGAAAGGCAACTGGAGGTTCGTCTGAAGGTATTGCACCCTTTCTGCAGCTGCCACATTTTAGCGAGACTGTTATCAAGAAGATTGCCAGGAAGAAGGTGAGAACATTTGAGGAGCTTCGAGACATGACCCGGGAAGATCGTGCTGACCTGCTTACTCAAGTAGCTGGCTTCTCATCTGCTGAAGTACATGATATTGATGTAGTTTTGGAAATGATGCCTTCTATAACAGTTGAAGTTACTTGCGAGACTGAGGGCGAAGAGGGTATTCAAGAAGGGGATGTCGTCACTGTACATGCTTGGGTAACACTCCGTAGAAATAACGGTCTGGTCGGAGCCCTTCCACACGCACCTTATTATCCATTTCACAAGGAAGAAAATTTTTGGATTTTACTTGCAGACCCAGTTTCAAATAATGTCTGGTTTTACCAGAAAGTGAGCTTTATGGACGATGCCTCTGCAGTGACTGCAGCTTCAAAGGCAATTGAGGAGCAAATGGAGGGATCTGGTGCTAGTGCAAAGGAAACAAGTGCTGCCATTAGAGAAGCAGTCGAGAAGGTGAAAAGTGGAGCGAGATTAGTACTAGGCAAGTTCCAGGCTCCTGCCGAAGGAAACTACAATTTGATCTGTTATTGCTTGTGTGACACATGGATTGGCTGCGATAAAAAGTCCAACTTGAAAATAAAAGTTTTGAAACGCACCCGAGCTGGCACTCGGGGAGGTGTGGTGGCAGAAGAGGGGCCGAGCATAGAGGACGGGATCGAAGAGGAAGAGGAGAACGAAGAAGAAGAATACGATGATGATTACGAGAGCGAATATAGCGAAGACGAGGCAGAGGAGGCGGATAGAAAGAAGAAGAGCACCGCATGTCAATGGTGCCGTTCATAA 1497 44.96 MGIALPQFLLNIDGASGGILLLWIVGVCILLPLVIAVVYLSRSSKYTGNYVMHQTLTTYYYLMKPSLAPSKVMDVFIKAAEYLEIPVRRTDNEPLQKLFLTVRSELNLDLKNIKQEQAKFWKQHPGLVKTELLIQAHLTRESADLPPSLQVDFRRVLELAPRLLEELMKMALIPRNTQGQGWLRPATGVIELSQCIIQAVPLNARKATGGSSEGIAPFLQLPHFSETVIKKIARKKVRTFEELRDMTREDRADLLTQVAGFSSAEVHDIDVVLEMMPSITVEVTCETEGEEGIQEGDVVTVHAWVTLRRNNGLVGALPHAPYYPFHKEENFWILLADPVSNNVWFYQKVSFMDDASAVTAASKAIEEQMEGSGASAKETSAAIREAVEKVKSGARLVLGKFQAPAEGNYNLICYCLCDTWIGCDKKSNLKIKVLKRTRAGTRGGVVAEEGPSIEDGIEEEEENEEEEYDDDYESEYSEDEAEEADRKKKSTACQWCRS 498
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 43804572 43808597 + Bma012850.1 Bma14g02040 96021

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g02040 498 SUPERFAMILY E set domains 281 435 IPR014756 -
Bma14g02040 498 MobiDBLite consensus disorder prediction 452 480 - -
Bma14g02040 498 Pfam Sec63 Brl domain 49 429 IPR004179 -
Bma14g02040 498 Gene3D C2 domain 279 440 IPR035892 -
Bma14g02040 498 SMART Sec63_2 36 431 IPR004179 -
Bma14g02040 498 MobiDBLite consensus disorder prediction 445 498 - -
Bma14g02040 498 Gene3D - 44 200 - -
Bma14g02040 498 PANTHER SEC63 DOMAIN-CONTAINING 1 489 - -
Bma14g02040 498 SUPERFAMILY Sec63 N-terminal domain-like 71 277 - -
Bma14g02040 498 Gene3D - 216 275 - -
Bma14g02040 498 PANTHER DNAJ PROTEIN ERDJ2-LIKE 1 489 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g02040 K09540 SEC63, DNAJC23; translocation protein SEC63 - jre:109011539 775.393
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi16g785 . . . Bda07g01902 Bpe03g00158 . . Bma14g02040 Cmo16g00097 Cmo18g01308 . . . . . . Cpe14g00076 . . . . . . . . . . . . . . . . Cone14ag0052 Cone15ag0058 Lsi05g01183 . . Cme06g01046 . Blo09g00057 . . . . . . . . . Cma16g00092 Cma18g01277 Car16g00082 Car18g01191 Cpe09g00060 . . . . . . . . Cla05g00924 Cam05g1012 Cec05g1016 Cco05g1012 Clacu05g1001 Cmu05g0954 Cre05g1035 . Csa03g01758 Chy06g00986 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005404 1 3 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 3 2 1 1 1 1 1 1 2 1 2 1 1 40
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bma14g02040 Bma_Chr14 FPKM 0.0 0.0 0.0 0.0 0.966256 0.0 0.837333 0.0 0.610349 0.0