Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g02048 ATGGCGAGAAAAGGTCCTTTCATGGAGACCCAACACTTCCACTTTCTCTGTCTAGTTCTTCTCTCTCTGCTCCCTGCTTTCTCTGCCTCCTTTGTTCCCTTAGATAATTACCTCCTCAATTGTGGGTCAGCCACGAACTCCTCGTTTTTTAACCGAATATTTATCGGCGATTCGACGAAATCCGGCTCCGTATTTCTCTCTTCGGACCGATCAGTTTCGGTTAAAGACCCAAACCCGCCTCCGAATTCACCCAGTTTGTACTATACAGCGAGAGTTTTCACAAGCTCTTCAAGCTATCGATTCGGCATCAAGAAAAACGGGACACATTTGGTACGTTTCCACTTCTCGCCGTTTGTAGTTCGAGATTTCGCTTTGGCCTCTGCCAATTTTAGCATTTTGGTTAATGGGTTTTTGCTTTTGAGTGATTTCCATGCTCGAAATACTACGATTAAGGAGTACATATTGACAGTGGAGGATAATCTTCTTCAAATTGTGTTTGAGCCCTTGGGCGATTCGGGTTTTGGATTTGTGAATGCCATTGAAGTCTTTTCTGCTCCTGTGGAGCTAATTAACGATAATGGAGCAAGATTAGTTGGGGAAATTGGGGTTGGAGAATTCTTCAATCTTTCATCACAAGTTCTAGAGACTGTTCTTAGGATTAATGTTGGAGGGTATGATATTACACCTTTCAATGACACTTTGTGGAGAACTTGGGTTCCTGACGATAATTTTTTGGTCCTTAAATCGGCTGCAAAACAAGCTATCACAACCCGTCCTCCGAATTACAAGGACTCCCTTTTAAGTCGAGAGATTGCTCCTGATAATGTTTATATGACAGCCCAGCAAATGAACAAAGAAAATGCAACTTTTGGGGATAAATTCAATATCACTTGGAGTTTTCCAGTGAGTAGAAGAGGCGGAATGCACTTAGTCAGGTTGCATTTCTGCGACATTGTTAGTTCGGCTCTTAATTTGTTGTATTTTAACGTATATATCAATGGCTATTCTGCCTATGCCGATATGGATTTGTCCTCTCTTTCCGTCCATTTACTTGCGTCGCCTCTTTACATTGATTTTATCGTGGATTCGGATGATAATGGAGTCATACAAGTAAGTGTCGGCCCTTCTGCTCTTAGCAGTCCTTTGAGGCTGAATGCGATTTTGAATGGTGCGGAGATCATGAGAATGGTGAATGAGAATGACAGTAGAAAGCAAGGACGAAAAAAGGAAAAAGATAAATGGATCGTAATAGGTTCGATTGTTGGCGGGTTCATAGGTTTATGTGTGATTGTAGTCATTATCTTCCTCGGTATAAAATGCAGGAAGAAGAAGAAACCTAAGCCGAGACGCTCAGAAAGTGGAGGTTGGACTTCATTGCATGCATTTGGTGGCAGTTCGATCAGTAGAATGACCGAGGGAAGAACTCTTGGATCTCCTGGTCCAAATGGTTATTATAGTTTGAAGATACCATTTAACGACGTAAAATTAGCGACAAAAGATTTCGATAAGAGTTTGATTATAGGTTCCGGTGGATTTGGTATGGTTTATAAGGGAGTTCTTAGAGACAATACGAAAGTTGCCGTGAAGAGAGCCCTACCTGGATCCAGGCAGGGCCTGCCGGAATTCCAGACGGAAATAACAGTTTTGTCCAAAATCCGGCATCACCATCTTGTTTCTCTTGTTGGGTATTGTGAGGAACAATCAGAAATGATTTTGGTTTATGAGTATATGGAAAAGGGTCCGTTGAAAACTCATTTATACGGTTCGAGATTCCCCCTTTGTCTTGGAAGCAACGGCTCGAAATATGCATTGGCTCGGCCAGAGGTCTTCACTACCTCCATACGGGTTTTGCTCAAGGTATCATCCATCGCGACATCAAGTCAACAAACATTCTGA 1896 42.3 MARKGPFMETQHFHFLCLVLLSLLPAFSASFVPLDNYLLNCGSATNSSFFNRIFIGDSTKSGSVFLSSDRSVSVKDPNPPPNSPSLYYTARVFTSSSSYRFGIKKNGTHLVRFHFSPFVVRDFALASANFSILVNGFLLLSDFHARNTTIKEYILTVEDNLLQIVFEPLGDSGFGFVNAIEVFSAPVELINDNGARLVGEIGVGEFFNLSSQVLETVLRINVGGYDITPFNDTLWRTWVPDDNFLVLKSAAKQAITTRPPNYKDSLLSREIAPDNVYMTAQQMNKENATFGDKFNITWSFPVSRRGGMHLVRLHFCDIVSSALNLLYFNVYINGYSAYADMDLSSLSVHLLASPLYIDFIVDSDDNGVIQVSVGPSALSSPLRLNAILNGAEIMRMVNENDSRKQGRKKEKDKWIVIGSIVGGFIGLCVIVVIIFLGIKCRKKKKPKPRRSESGGWTSLHAFGGSSISRMTEGRTLGSPGPNGYYSLKIPFNDVKLATKDFDKSLIIGSGGFGMVYKGVLRDNTKVAVKRALPGSRQGLPEFQTEITVLSKIRHHHLVSLVGYCEEQSEMILVYEYMEKGPLKTHLYGSRFPLCLGSNGSKYALARPEVFTTSIRVLLKVSSIATSSQQTF 631
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 43846303 43848198 - Bma012857.1 Bma14g02048 96029

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g02048 631 PANTHER OS07G0166700 PROTEIN 24 592 IPR045272 GO:0004714|GO:0006468
Bma14g02048 631 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 24 592 - -
Bma14g02048 631 Gene3D - 213 397 - -
Bma14g02048 631 Gene3D - 36 187 - -
Bma14g02048 631 Pfam Malectin-like domain 39 395 IPR024788 -
Bma14g02048 631 ProSiteProfiles Protein kinase domain profile. 501 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma14g02048 631 Gene3D Phosphorylase Kinase; domain 1 480 576 - -
Bma14g02048 631 SUPERFAMILY Protein kinase-like (PK-like) 477 591 IPR011009 -
Bma14g02048 631 SMART tyrkin_6 501 631 IPR020635 GO:0004713|GO:0006468
Bma14g02048 631 ProSitePatterns Protein kinases ATP-binding region signature. 507 529 IPR017441 GO:0005524
Bma14g02048 631 Pfam Protein tyrosine and serine/threonine kinase 506 588 IPR001245 GO:0004672|GO:0006468
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g02048 - - - zju:107409040 754.592
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma14g02048 Bma-Chr14:43846303 Bma09g00253 Bma-Chr9:13010364 1.30E-124 dispersed
Bma14g02048 Bma-Chr14:43846303 Bma11g00140 Bma-Chr11:1239187 8.03E-125 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi16g749 . . . Bda07g01898 Bpe03g00149 . . Bma14g02048 Cmo16g00112 Cmo18g01293 . . . . . . Cpe14g00089 . . . . . . . . . . . . . . . . . . Lsi05g01200 . . . . Blo09g00068 . . . . . . . . . Cma16g00104 Cma18g01264 Car16g00093 Car18g01174 Cpe09g00072 . . . . . . . . Cla05g00907 . . . . . . . Csa03g01740 Chy06g00971 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009011 1 0 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 1 2 1 1 1 1 0 0 1 0 1 0 1 29
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66925 PF12819 Malectin_like 1.50E-32 CL0202 Bma PK
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bma14g02048 Bma_Chr14 FPKM 24.455488 23.973372 26.273096 25.127312 27.73336 21.80253 25.257103 12.7793 12.165927 12.970263