Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g02068 ATGTCTTTTTTCTGGAATCAAGACTCTTCCTACTCTACCCACACTGATTCACCCACCGCCCAATATGGCGGCCGCTCCTCCTCCGCCCGTAGAACTTCTCCGCCCTCCAATGGCGGCCACTCGAAGTACCGGGGTGTAAGGAGCCGGAGTGGGAAATGGGTTTCGGAGATACGGGAGCCGCGTAAAACTACGCGCATTTGGCTCGGGACGTACTCCACGCCGGAGATGGCGGCTGCCGCCTATGATGTGGCGGCGCTGGCATTGAAAGGGCCGGATACGACGTTGAATTTTCCGAATTCGATTTATTCTTATCCCGTTCCGGCTTCTACCTCGGCGAATGATATTCGAGCGGCGGCGGCAAGGGCGGCGGAGGCTTTTGGGTCGTCGGAGGGTTCCGGGAGGGTGGGCCAATTTGGAAATTATGAGGGGGAGAGTTCTGGATCGGCTGCTGGAGGGGAGTACGTGGATGAGGAGGCCCTGTTGAATATGCCGAATTTGCTGGCAGATATGGCGGAGGGAATGATGGTTAGCCCTCCCAGGATGCAGTACTCCGATTACTCGTCGGAGAATTTCAACGGGGATGAGCTATGGCGATGA 597 56.95 MSFFWNQDSSYSTHTDSPTAQYGGRSSSARRTSPPSNGGHSKYRGVRSRSGKWVSEIREPRKTTRIWLGTYSTPEMAAAAYDVAALALKGPDTTLNFPNSIYSYPVPASTSANDIRAAAARAAEAFGSSEGSGRVGQFGNYEGESSGSAAGGEYVDEEALLNMPNLLADMAEGMMVSPPRMQYSDYSSENFNGDELWR 198
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 44050117 44050713 + Bma012877.1 Bma14g02068 96049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g02068 198 Gene3D AP2/ERF domain 41 100 IPR036955 GO:0003700|GO:0006355
Bma14g02068 198 ProSiteProfiles AP2/ERF domain profile. 42 98 IPR001471 GO:0003700|GO:0006355
Bma14g02068 198 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 28 197 - -
Bma14g02068 198 SUPERFAMILY DNA-binding domain 41 100 IPR016177 GO:0003677
Bma14g02068 198 MobiDBLite consensus disorder prediction 1 54 - -
Bma14g02068 198 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF026 28 197 - -
Bma14g02068 198 SMART rav1_2 42 104 IPR001471 GO:0003700|GO:0006355
Bma14g02068 198 MobiDBLite consensus disorder prediction 1 39 - -
Bma14g02068 198 CDD AP2 41 100 IPR001471 GO:0003700|GO:0006355
Bma14g02068 198 Pfam AP2 domain 41 90 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma08g00344 Bma-Chr8:6213901 Bma14g02068 Bma-Chr14:44050117 2.77E-50 dispersed
Bma10g01191 Bma-Chr10:42138525 Bma14g02068 Bma-Chr14:44050117 4.45E-50 dispersed
Bma12g00104 Bma-Chr12:1683182 Bma14g02068 Bma-Chr14:44050117 2.90E-43 dispersed
Bma12g01132 Bma-Chr12:43705302 Bma14g02068 Bma-Chr14:44050117 6.93E-26 dispersed
Bma14g02068 Bma-Chr14:44050117 Bma08g00345 Bma-Chr8:6219460 5.04E-36 dispersed
Bma14g02068 Bma-Chr14:44050117 Bma14g02069 Bma-Chr14:44058205 5.89E-39 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58440 PF00847 AP2 8.40E-12 CL0081 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g02068 - - jre:108998614 200.675