Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g02069 ATGGACAACTTTTCGAATTTTTATGAGATGTTCTCTTTTTGTTCGCCGGATTGTTTGCCGGAAGTGTCAAGCTCCGAGAGCAGTACTTCTAAGGCTAAGGGGGCGAATTTTTCCGACGAGGAGGTAATGTTGGCGTCAAAGCATCCGAAGAAGAAGGCGGGGAGGAAGAAGTTTAAAGAGACGAGGCACTCGGTTTACAGAGGAGTGAGAAGAAGAAATTCCGGCAAGTGGGTGAGTGAGGTGAGAGAGCCCAACAAGAAGTCCAGGATTTGGTTGGGGACTTTTCAGACCGCCGAAATGGCGGCTCGGGCACATGATGTGGCGGCACTGGCCCTGAGAGGCCGGTCTGCTTGTCTGAACTTCGCCGACTCCGTATGGCGGCTCCCCGTGCCGGATTCCGCCAACCCCAAGGACATTCAAAAGGCAGCAGCAGAAGCGGCAGAGATGTTCCGACAGGCGGAGTCCGATTCGTTGAGTTTGGACAATTCGACACCGGAAATGTCAAAAACTTGCAGCAAAACGTCAGCCACTGTTGACGAAATGACGGCGGAGACATCACCAAACTGGTGGGTTTTGGACGAGGATGATGTTTTCAGCATGCCTGGACTGCTGATGAACATGGCGGAGGGAATGTTGTTGCCGCCGCCACAGTGTCTGGTAGATGCTGACGCGGGATTAGAGACTGATGTGGCATTATGGAGTTATTCATTTTAA 714 51.96 MDNFSNFYEMFSFCSPDCLPEVSSSESSTSKAKGANFSDEEVMLASKHPKKKAGRKKFKETRHSVYRGVRRRNSGKWVSEVREPNKKSRIWLGTFQTAEMAARAHDVAALALRGRSACLNFADSVWRLPVPDSANPKDIQKAAAEAAEMFRQAESDSLSLDNSTPEMSKTCSKTSATVDEMTAETSPNWWVLDEDDVFSMPGLLMNMAEGMLLPPPQCLVDADAGLETDVALWSYSF 237
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 44058205 44058918 + Bma012878.1 Bma14g02069 96050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g02069 237 MobiDBLite consensus disorder prediction 20 35 - -
Bma14g02069 237 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 24 236 IPR045277 GO:0003700
Bma14g02069 237 Pfam AP2 domain 64 114 IPR001471 GO:0003700|GO:0006355
Bma14g02069 237 Gene3D AP2/ERF domain 65 123 IPR036955 GO:0003700|GO:0006355
Bma14g02069 237 CDD AP2 64 124 IPR001471 GO:0003700|GO:0006355
Bma14g02069 237 SUPERFAMILY DNA-binding domain 64 124 IPR016177 GO:0003677
Bma14g02069 237 MobiDBLite consensus disorder prediction 20 59 - -
Bma14g02069 237 SMART rav1_2 65 128 IPR001471 GO:0003700|GO:0006355
Bma14g02069 237 ProSiteProfiles AP2/ERF domain profile. 65 122 IPR001471 GO:0003700|GO:0006355
Bma14g02069 237 PANTHER AP2/ERF DOMAIN-CONTAINING TRANSCRIPTION FACTOR 24 236 - -
Bma14g02069 237 PRINTS Ethylene responsive element binding protein signature 66 77 IPR001471 GO:0003700|GO:0006355
Bma14g02069 237 PRINTS Ethylene responsive element binding protein signature 88 104 IPR001471 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma08g00345 Bma14g02069 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00268 Bma-Chr1:2231551 Bma14g02069 Bma-Chr14:44058205 3.63E-24 dispersed
Bma04g00571 Bma-Chr4:5170740 Bma14g02069 Bma-Chr14:44058205 5.84E-47 dispersed
Bma10g00080 Bma-Chr10:807382 Bma14g02069 Bma-Chr14:44058205 2.02E-47 dispersed
Bma10g01190 Bma-Chr10:42087308 Bma14g02069 Bma-Chr14:44058205 4.29E-65 dispersed
Bma12g01131 Bma-Chr12:43700609 Bma14g02069 Bma-Chr14:44058205 1.46E-73 dispersed
Bma14g00582 Bma-Chr14:6297605 Bma14g02069 Bma-Chr14:44058205 1.19E-14 dispersed
Bma14g02069 Bma-Chr14:44058205 Bma11g00534 Bma-Chr11:6799293 2.85E-35 dispersed
Bma14g02068 Bma-Chr14:44050117 Bma14g02069 Bma-Chr14:44058205 5.89E-39 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58441 PF00847 AP2 5.20E-14 CL0081 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g02069 - K09286 nnu:104612692 271.166