Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g02131 ATGGCTGCTTCTACTATGGCTCTTTCTTCACCATCTTTTGCCGGAAAGGCAGTGAAGATTACTCCCTCTACTTCGGAGATTGTCGGCAATGGAAGAGTCAGTATGAGGAAGACTGCCGGTAAGGCCGTCTCTTCCGGCACCCCATGGTACGGACCTGACCGTGTAAAATACTTGGGTCCGTTCTCCGGCGCTCCGTCCTATCTGACTGGAGAATTCCCAGGAGATTACGGTTGGGACACCGCAGGACTATCCGCAGACCCTGAGACATTCGCAAAGAACCGAGAGCTCGAAGTCATCCACTCGCGGTGGGCCATGCTCGGAGCTCTAGGCTGCGTATTCCCGGAGCTTCTATCCCGGAATGGAGTGAAATTCGGAGAGGCAGTGTGGTTCAAGGCGGGATCTCAGATATTCAGCGACGGAGGGCTAGATTACTTGGGCAACCCGAGCTTGGTCCATGCTCAGAGCATCTTAGCCATCTGGGCAAGTCAGGTAGTTTTGATGGGCGCCGTCGAAGGCTACCGTATTGCTGGAGGGCCACTCGGAGAAGTCACCGACCCAATTTACCCGGGTGGCTCGTTTGACCCGTTGGGTCTGGCTGACGACCCGGAAGCATTTGCTGAGCTGAAAGTGAAAGAGTTAAAGAATGGAAGACTAGCCATGTTCTCGATGTTCGGATTCTTCGTTCAGGCCATTGTCACCGGAAAAGGACCTTTGGAGAATTTGGCCGATCACCTTGCAGACCCTGTAAACAACAACGCCTGGGCTTATGCCACCAACTTTGTTCCCGGAAAG 792 53.79 MAASTMALSSPSFAGKAVKITPSTSEIVGNGRVSMRKTAGKAVSSGTPWYGPDRVKYLGPFSGAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 44960066 44967058 - Bma030763 Bma14g02131 96112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g02131 264 Pfam Chlorophyll A-B binding protein 64 230 IPR022796 -
Bma14g02131 264 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 3, CHLOROPLASTIC 1 264 - -
Bma14g02131 264 Gene3D Chlorophyll a/b binding protein domain 56 257 - -
Bma14g02131 264 SUPERFAMILY Chlorophyll a-b binding protein 52 261 - -
Bma14g02131 264 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 264 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma14g00970 Bma-Chr14:11191205 Bma14g02131 Bma-Chr14:44960066 0 dispersed
Bma14g01769 Bma-Chr14:38041790 Bma14g02131 Bma-Chr14:44960066 2.93E-165 dispersed
Bma14g02131 Bma-Chr14:44960066 Bma14g00933 Bma-Chr14:10657380 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g02131 K08912 - rcu:8289767 511.146