Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma15g00030 ATGGAGTCAAACGGAAGTAACGTTTGCTTGGAAATAGCAATGGAGGTTCATCAGGTTTTGGCGCCACCCCATAAAACGTCCATGCAAAAGCTGAAGAACAGACTGAAAGAGACCTTCTTCTCCGACGACCCTCTCCGTCAGTTTAAAGGGCAGCCTACGAAGAGGAAGTGGATTCTTGCAGTTCAGTATTTCTTCCCTATTCTTCAATGGGGTCCTACCTACACTCTCAAGCTTTTCAAATCCGACATTGTTTCTGGCCTTACAATTGCTAGTTTAGCCATTCCTCAGGTCTTTATGCCTAAGCTAGCAAATCTTCCTCCAATCGTGGGTCTCTATTCAAGCTTTGTTCCTCCTCTGGTATATGCTGTTCTTGGTAGCTCGAGGGATCTGGCAGTAGGCCCAGTTTCAATTGCTTCGCTCATACTTGGATCAATGTTGAGGCAAGAAGTTTCTCCAACTAAAGACCCTCTTCTCTTTCTTCAGCTTGCTCTCACTTCCACTCTCTTTGCTGGGCTCTTCCAAGCTTCTTTGGGTTTTTTAAGGCTTGGATTTATAATTGATTTTCTGTCAAAGGCGACACTGATTGGGTTCATGGGAGGAGCCGCCATTATCGTGTCTCTGCAACAGCTTAGAAGCCTGCTGGGGATCCAGCATTTCACAACCCAAATGGGTTTAATCCCTGTCTTGACCTCCGTTTTTCATCTGATAATGGTTGTTGTGTTCTGGGGATGTGTGCAGTGGTCATGGCAGACTATACTGATGGGAGCCTGCTTCCTCTTTTTACTGCTTCTCACCAGACACATTGGCATGAAAAGGCCGAAGCTGTTCTGGGTGTCAGCCGGAGCCCCTCTTGTCTCTGTCATTCTCTCCACCATCCTCGTTTTCGCTTTCAAAGCTAACAGACATGGGATCAGCATTATCGGAAAATTGCAAGAAGGCCTCAATCCTGCCTCGTTGAATATGCTGTACTTTAAAGGCGAGTATTTAGGGCTTGTATTGAAGACTGGCCTCGTCACTGGCATCATTTCTCTCACTGAAGGAATTGCAGTTGGGCGGACTTTTGCTGCTATAAAGGACTATCGAGTTGATGGAAACAAAGAGATGATAGCTATTGGCCTAATGAACGTGGTTGGCTCATTTACTTCTTGTTATGTAACAACAGGTGCCTTTTCAAGGTCAGCTGTGAATCACAATGCCGGAGCCAAAACTGCAGTATCTAACATCGTAATGTCTGTTACGGTTATGGTGACACTTCTCTTCCTAATGCCCCTATTTCAATATACGCCAAATCTTGTATTGGCTGCAATTATTGTTACAGCTGTGGTTGGCCTCATTGATGTACCTGCTGCTTGTAGCATTTGGAAGATTGACAAATTCGATTTTGTTATAATGTTATGTGCATTCTTTGGAGTTCTTTTGATCTCCGTCCAAAATGGCCTGGCTATTGTTGGTTTGTCCATTTTGAAGATCATCCTGCAAGTAGCCAGGCCGAAAACAATGATGCTGGGTAACATTCCCGGGACAGATATATATCGTAATATTCACCATTACAAGGAAGCCCTGAGAGTTCCTGGCTTTCTTATTTTATGCATTGAAGCTCCAATCAACTTTGCCAACACCACATATCTCAATGAAAGGATATTGAGATGGATAGAAGAATATGAAGCAGAAGATGATAACATTAAAAAGGCATCAAGCCTTCACTTTCTCATACTAGAAATGTCAGCTGTGAGTGCCATAGACACAAGTGGAGTTACACTTTTCAATGACTTGAGGAGATCTATGGAAAAGAAGGGTCTTGTATTGGTGAATCCAGTGGGAGAGGTTATGGAGAAGTTAATAAAAGCAGACGATGGCAGAGAATTTATGAGGCCAGATAATCTGTACTTGACAGTTGGCGAGGCAGTAGCTTTTCTCTCAACGACAAGTCAAAGGACAACCATAAGGAATGTTGAATGA 1959 43.59 MESNGSNVCLEIAMEVHQVLAPPHKTSMQKLKNRLKETFFSDDPLRQFKGQPTKRKWILAVQYFFPILQWGPTYTLKLFKSDIVSGLTIASLAIPQVFMPKLANLPPIVGLYSSFVPPLVYAVLGSSRDLAVGPVSIASLILGSMLRQEVSPTKDPLLFLQLALTSTLFAGLFQASLGFLRLGFIIDFLSKATLIGFMGGAAIIVSLQQLRSLLGIQHFTTQMGLIPVLTSVFHLIMVVVFWGCVQWSWQTILMGACFLFLLLLTRHIGMKRPKLFWVSAGAPLVSVILSTILVFAFKANRHGISIIGKLQEGLNPASLNMLYFKGEYLGLVLKTGLVTGIISLTEGIAVGRTFAAIKDYRVDGNKEMIAIGLMNVVGSFTSCYVTTGAFSRSAVNHNAGAKTAVSNIVMSVTVMVTLLFLMPLFQYTPNLVLAAIIVTAVVGLIDVPAACSIWKIDKFDFVIMLCAFFGVLLISVQNGLAIVGLSILKIILQVARPKTMMLGNIPGTDIYRNIHHYKEALRVPGFLILCIEAPINFANTTYLNERILRWIEEYEAEDDNIKKASSLHFLILEMSAVSAIDTSGVTLFNDLRRSMEKKGLVLVNPVGEVMEKLIKADDGREFMRPDNLYLTVGEAVAFLSTTSQRTTIRNVE 652
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 327736 332418 + Bma012999.1 Bma15g00030 96152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma15g00030 652 Gene3D STAS domain 496 642 IPR036513 -
Bma15g00030 652 CDD STAS_SulP_like_sulfate_transporter 517 632 - -
Bma15g00030 652 Pfam Sulfate permease family 79 466 IPR011547 GO:0016021
Bma15g00030 652 ProSitePatterns SLC26A transporters signature. 107 128 IPR018045 GO:0008271|GO:0008272
Bma15g00030 652 PANTHER SULFATE TRANSPORTER 15 641 IPR001902 GO:0015301|GO:0016020|GO:0055085
Bma15g00030 652 PANTHER BNAA09G30120D PROTEIN 15 641 IPR030313 -
Bma15g00030 652 ProSiteProfiles STAS domain profile. 516 639 IPR002645 -
Bma15g00030 652 TIGRFAM sulP: sulfate permease 66 613 IPR001902 GO:0015301|GO:0016020|GO:0055085
Bma15g00030 652 Pfam STAS domain 517 635 IPR002645 -
Bma15g00030 652 SUPERFAMILY SpoIIaa-like 521 639 IPR036513 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma09g00925 Bma-Chr9:48649694 Bma15g00030 Bma-Chr15:327736 0 dispersed
Bma15g00030 Bma-Chr15:327736 Bma15g00623 Bma-Chr15:7974865 0 dispersed
Bma15g00030 Bma-Chr15:327736 Bma15g00384 Bma-Chr15:4273098 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma15g00030 K17471 - qsu:112025469 964.526