Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma15g00044 | TACAGGGAAAATTTTATCGGCTGCCAAACAGAAAAGTTTCTATCTTTAATGGAAACTTTTCAAGGCCTTCTCAAAATTAGGGTTCAAAGAGGAGTTAATCTGGCTGTTCGTGATGTTCGAACTCGCACCAGTGATCCATACGTTGTCATTTCCATGGCTCAACAGAGATTGACGACTCGGGTGGTGAAGAAGAACTGCAATCCCGTTTGGAATGAGGATTTCACTCTTTCCATTTCAAATCTCAATACTCCAATAACCCTAACAGTGTATGACAAAGACAAGTTCACAGAAGATGATAAAATGGGTGATGCAGAGATTGACATCAAACCCTACATAGAATGTCTTCAAATGGGTTTGAAGAATCTACCAAATGGGTGCGCTGTTAAGAGAATTCAGCCGGACCGCTCGAACTGCCTCTCCGACGAGAGCTCGTGTGTTTGGAACGACGGAAAAATTGTTCAGGACATGCCTCTCCGGTTGAGGAATGTAGAGTGTGGGGAAGTTATGATTCAGATCGAGTTGATCGTTGGTCCTCAATCTAAACGTTATTTGGCCATTAAAGACTAG | 567 | 42.68 | YRENFIGCQTEKFLSLMETFQGLLKIRVQRGVNLAVRDVRTRTSDPYVVISMAQQRLTTRVVKKNCNPVWNEDFTLSISNLNTPITLTVYDKDKFTEDDKMGDAEIDIKPYIECLQMGLKNLPNGCAVKRIQPDRSNCLSDESSCVWNDGKIVQDMPLRLRNVECGEVMIQIELIVGPQSKRYLAIKD | 188 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 614208 | 615164 | + | Bma013018.1 | Bma15g00044 | 96166 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma15g00044 | 188 | ProSiteProfiles | C2 domain profile. | 8 | 124 | IPR000008 | - | |
Bma15g00044 | 188 | Pfam | C2 domain | 23 | 110 | IPR000008 | - | |
Bma15g00044 | 188 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 4 | 17 | 180 | IPR044562 | - | |
Bma15g00044 | 188 | Gene3D | C2 domain | 16 | 183 | IPR035892 | - | |
Bma15g00044 | 188 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 18 | 109 | IPR035892 | - | |
Bma15g00044 | 188 | PRINTS | C2 domain signature | 40 | 52 | IPR000008 | - | |
Bma15g00044 | 188 | PRINTS | C2 domain signature | 64 | 77 | IPR000008 | - | |
Bma15g00044 | 188 | PRINTS | C2 domain signature | 85 | 93 | IPR000008 | - | |
Bma15g00044 | 188 | CDD | C2_ArfGAP | 22 | 166 | - | - | |
Bma15g00044 | 188 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 10 | 17 | 180 | - | - | |
Bma15g00044 | 188 | SMART | C2_3c | 23 | 120 | IPR000008 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma08g00055 | Bma-Chr8:725775 | Bma15g00044 | Bma-Chr15:614208 | 1.74E-61 | dispersed | |
Bma12g01244 | Bma-Chr12:45450317 | Bma15g00044 | Bma-Chr15:614208 | 2.62E-59 | dispersed | |
Bma14g01888 | Bma-Chr14:40383250 | Bma15g00044 | Bma-Chr15:614208 | 3.96E-103 | dispersed | |
Bma01g00463 | Bma-Chr1:3836620 | Bma15g00044 | Bma-Chr15:614208 | 2.06E-73 | transposed | |
Bma14g01916 | Bma-Chr14:40896233 | Bma15g00044 | Bma-Chr15:614208 | 1.65E-101 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma15g00044 | - | - | zju:107429323 | 249.595 |