Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma15g00044 TACAGGGAAAATTTTATCGGCTGCCAAACAGAAAAGTTTCTATCTTTAATGGAAACTTTTCAAGGCCTTCTCAAAATTAGGGTTCAAAGAGGAGTTAATCTGGCTGTTCGTGATGTTCGAACTCGCACCAGTGATCCATACGTTGTCATTTCCATGGCTCAACAGAGATTGACGACTCGGGTGGTGAAGAAGAACTGCAATCCCGTTTGGAATGAGGATTTCACTCTTTCCATTTCAAATCTCAATACTCCAATAACCCTAACAGTGTATGACAAAGACAAGTTCACAGAAGATGATAAAATGGGTGATGCAGAGATTGACATCAAACCCTACATAGAATGTCTTCAAATGGGTTTGAAGAATCTACCAAATGGGTGCGCTGTTAAGAGAATTCAGCCGGACCGCTCGAACTGCCTCTCCGACGAGAGCTCGTGTGTTTGGAACGACGGAAAAATTGTTCAGGACATGCCTCTCCGGTTGAGGAATGTAGAGTGTGGGGAAGTTATGATTCAGATCGAGTTGATCGTTGGTCCTCAATCTAAACGTTATTTGGCCATTAAAGACTAG 567 42.68 YRENFIGCQTEKFLSLMETFQGLLKIRVQRGVNLAVRDVRTRTSDPYVVISMAQQRLTTRVVKKNCNPVWNEDFTLSISNLNTPITLTVYDKDKFTEDDKMGDAEIDIKPYIECLQMGLKNLPNGCAVKRIQPDRSNCLSDESSCVWNDGKIVQDMPLRLRNVECGEVMIQIELIVGPQSKRYLAIKD 188
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 614208 615164 + Bma013018.1 Bma15g00044 96166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma15g00044 188 ProSiteProfiles C2 domain profile. 8 124 IPR000008 -
Bma15g00044 188 Pfam C2 domain 23 110 IPR000008 -
Bma15g00044 188 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 17 180 IPR044562 -
Bma15g00044 188 Gene3D C2 domain 16 183 IPR035892 -
Bma15g00044 188 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 18 109 IPR035892 -
Bma15g00044 188 PRINTS C2 domain signature 40 52 IPR000008 -
Bma15g00044 188 PRINTS C2 domain signature 64 77 IPR000008 -
Bma15g00044 188 PRINTS C2 domain signature 85 93 IPR000008 -
Bma15g00044 188 CDD C2_ArfGAP 22 166 - -
Bma15g00044 188 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 10 17 180 - -
Bma15g00044 188 SMART C2_3c 23 120 IPR000008 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma08g00055 Bma-Chr8:725775 Bma15g00044 Bma-Chr15:614208 1.74E-61 dispersed
Bma12g01244 Bma-Chr12:45450317 Bma15g00044 Bma-Chr15:614208 2.62E-59 dispersed
Bma14g01888 Bma-Chr14:40383250 Bma15g00044 Bma-Chr15:614208 3.96E-103 dispersed
Bma01g00463 Bma-Chr1:3836620 Bma15g00044 Bma-Chr15:614208 2.06E-73 transposed
Bma14g01916 Bma-Chr14:40896233 Bma15g00044 Bma-Chr15:614208 1.65E-101 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma15g00044 - - zju:107429323 249.595