Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma15g00054 ATGGAACCTCTGGTTCCAAATTACTGTTTTCCCTTCCTTCTCATTCTGTCCTGCCTTTGTTTCTCCGTTTCTGTTCCACTTGTGGTGGGGGCGGGTGATGGAGAAGCTCTTCTGGCTCTTGGAAGCTCGACAGACAGTGGGAACTCTCTTCACTGGAGTGGAGATGATTTCTGCCACTGGAAAGGAGTGAAAGATTGCAAAAATGGCAGAGTCACTAAGCTTGTTTTGGAGCATCTAAATCTCTCCGGTGTTCTCGACGGACGGATCTTGAACCGTCTAGATCAGCTTCGCGTTCTCAGCTTCAAAGGAAATTCTCTTTCCGGCCAAATCCCTGATCTCTCTTCCCTCCTCGACCTTAAATCCCTCTTTCTCAACGACAACAACTTCTCCGGCGTTCTTCCGTCCTCCCTAGCCGATCTCCATCGCTTGAAAGTCATCGTACTGTCGGGAAATCATATCTCCGGCGCAATTCCTACTTCGCTTCTCAGACTTCGGCGACTCTACATTCTTAACCTGGAAAACAATCGATTTACGGGAGATGTTCCTCCTCTGAATCAAACCGCTCTCAGATTCTTCAATGTCTCTAATAACCAGCTATCCGGCCCCATTCCGGTGACCATTGCGTTGGTCCAATTCAATGCGTCTTCGTTCTTGGGAAATATTCATCTCTGCGGAGAACAGATTCACATTCAATGTACAGATTTTGGGATTTCGCCCTCGCTCAGCCCGACTACAGCCGGAAATTCAAAGTGGACAAGTAAAAGAAAGACGAAGATAATCGCGGGAACCATAGGTGGATTCATTGGCATTTTGATCGTTATATTTCTGGTGTGGTGTTTGGTTAGCAGGAAACGGAGGGAAAAAAAGAGCGTGCCGGAGAATAGAAGCAAAGGAACAGTGGCGGCAGATGAGAGGGAAATGGGAGAGGCGTCGGGCGGTGGCAGAGGCGGTAATAACGGAGCAAAACAAGGAGGATTTTCGTGGGAGGATGAGGGTCTAGGGAGTCTGGTGTTCTGCGAAGCAGGAGATCAGGAAATGAGCTACAGTCTAGAGGATTTACTGAAAGCGTCGGCGGAGACGCTCGGGAGGGGGAGCGTGGGAAGCACGTACAAGGCGGTGATGGAATCGGGTTATATCGTGACGGTGAAGAGGCTAAAAGACGCGAAATACCCTCCCTTGGACGATTTCAGGAGACAGATGACGGCTCTCGGTAGGCTCAGACACCAGAACTTGGTGCCAATCAGAGCTTACTTCCAGGCTAAAGAGGAACGCCTTCTCGTGTATGATTACTTCCCCAATGGCAGTCTCTTCTCTCTCGTTCACGGGTCAAGAACATCAGCTGGAGGAAAACCTCTACATTGGACTTCGTGTCTCAAAATAGCAGAAGACTTGGCAAATGGTTTATTGTATATCCATCAGAACAGTGGCTTAACACATGGAAATTTGAAGTCTTCAAATGTCTTGTTAGGAACAGACTTTGAATCCTGTCTCACAGATTACGGTCTAACGCCATTCCGGAATCCTGATTCGGGAGAAGAACCAAGTGCTACTTCTCTCTTCTATAAAGCACCCGAATGCCGCGACATACGAAAGCCATGCACTCAACCAGCTGATGTCTACAGCTTTGGGGTTCTCCTTTTGGAGCTTTTGACAGGAAAAACACCTTTCCAAGACCTCGTCCAAGAACATGGGTCTGACATCCCTACGTGGGTGAGGTCGGTTCGAGAAGAAGAAACCGAGTCCGGGGACGACCCAGCTTCGGGAAATGAGGCTTCCGAGGAGAAACTACAAGCGCTTTTGAACATCACAATGGCATGCGTGACGCTAGTGCCGGAGAATCGGCCTACAATGCGGGAGGTTTTGAAGATGATAAGAGACTCAAGAGGAGAAGCTCAGGTGTCATCCAACAGCAGCGATCATTCGCCGGGAAGATGGTCGGATACCATTCAGAGCTTACCAAGAGAAGAACATTCGAGCATTTGA 1983 48.87 MEPLVPNYCFPFLLILSCLCFSVSVPLVVGAGDGEALLALGSSTDSGNSLHWSGDDFCHWKGVKDCKNGRVTKLVLEHLNLSGVLDGRILNRLDQLRVLSFKGNSLSGQIPDLSSLLDLKSLFLNDNNFSGVLPSSLADLHRLKVIVLSGNHISGAIPTSLLRLRRLYILNLENNRFTGDVPPLNQTALRFFNVSNNQLSGPIPVTIALVQFNASSFLGNIHLCGEQIHIQCTDFGISPSLSPTTAGNSKWTSKRKTKIIAGTIGGFIGILIVIFLVWCLVSRKRREKKSVPENRSKGTVAADEREMGEASGGGRGGNNGAKQGGFSWEDEGLGSLVFCEAGDQEMSYSLEDLLKASAETLGRGSVGSTYKAVMESGYIVTVKRLKDAKYPPLDDFRRQMTALGRLRHQNLVPIRAYFQAKEERLLVYDYFPNGSLFSLVHGSRTSAGGKPLHWTSCLKIAEDLANGLLYIHQNSGLTHGNLKSSNVLLGTDFESCLTDYGLTPFRNPDSGEEPSATSLFYKAPECRDIRKPCTQPADVYSFGVLLLELLTGKTPFQDLVQEHGSDIPTWVRSVREEETESGDDPASGNEASEEKLQALLNITMACVTLVPENRPTMREVLKMIRDSRGEAQVSSNSSDHSPGRWSDTIQSLPREEHSSI 660
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 717575 722800 + Bma013028.1 Bma15g00054 96176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma15g00054 660 Gene3D Ribonuclease Inhibitor 32 185 IPR032675 -
Bma15g00054 660 MobiDBLite consensus disorder prediction 290 324 - -
Bma15g00054 660 Gene3D Transferase(Phosphotransferase) domain 1 431 646 - -
Bma15g00054 660 Gene3D Ribonuclease Inhibitor 186 234 IPR032675 -
Bma15g00054 660 Gene3D Phosphorylase Kinase; domain 1 336 430 - -
Bma15g00054 660 ProSiteProfiles Protein kinase domain profile. 355 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma15g00054 660 Pfam Protein kinase domain 358 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma15g00054 660 MobiDBLite consensus disorder prediction 629 660 - -
Bma15g00054 660 MobiDBLite consensus disorder prediction 290 310 - -
Bma15g00054 660 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 12 650 - -
Bma15g00054 660 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 12 650 - -
Bma15g00054 660 Pfam Leucine rich repeat 119 177 IPR001611 GO:0005515
Bma15g00054 660 MobiDBLite consensus disorder prediction 627 660 - -
Bma15g00054 660 SUPERFAMILY L domain-like 50 222 - -
Bma15g00054 660 SUPERFAMILY Protein kinase-like (PK-like) 359 631 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma15g00054 Bma-Chr15:717575 Bma08g01217 Bma-Chr8:51208071 2.99E-107 dispersed
Bma09g00270 Bma-Chr9:15525844 Bma15g00054 Bma-Chr15:717575 2.73E-135 transposed
Bma14g01626 Bma-Chr14:34297610 Bma15g00054 Bma-Chr15:717575 0 transposed
Bma14g01908 Bma-Chr14:40794714 Bma15g00054 Bma-Chr15:717575 2.89E-67 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66931 PF00069 Pkinase 2.10E-35 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma15g00054 - - csv:101209119 908.672