Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma15g00064 ATGCCTTCTCTTTCACCTACAATGACAGAGGGAAACATTGCAAGATGGTTGAAGAAAGAGGGTGATAAAGTTTCTCCTGGTGAAGTGCTTTGTGAAGTTGAAACTGATAAAGCTACTGTTGAGATGGAATGCATGGAAGAAGGCTATCTTGCAAAGATAATATGTGGGGACGGGGCGAAAGAAATTAAAGTTGGGGAGGTGATTGCCATAACAGTTGAAGATGAGGAAGACATTGCCAAATTTAATGACTATAAACCTGGATCGTCAAGTACTGATGCTGCTCCTGCCAAGGAGTCATCTAGCCCACCTAAAAAAGAGGTGGTTGATGAACCTGTCCAATCACCACCAGAGCCGAAGACTCCAAAGCTGAGCAGTTCCCCACCCGTTGGAGATCGCATCTTTGCTAGTCCTCTAGCTAGAACGTTGGCCGAAAAAGAAAATGTGTCTCTTTCAAACATCAAAGGAACAGGTCCTGATGGAACCATTGTAAAGGCTGATGTTGAAGAGTATTTGGCATCTCGTGGGAAGGACACTTCAGTGGCAGCTGCAGCTTCCAAGTCCAAGGGTGCAGCCCCTGCATCTCTAGATTACACTGACATTCCTCATTCTCAGATAAGAAAGGTTACAGCTTCTCGATTATTGTTCTCAAAGCAAACTATTCCGCATTATTACTTAACGGTAGATGCACGTGTCGACAAACTGATGGATTTGAGAAACCAGCTCAATTCACTACAAGAAGCATCTGGAGGAAAGCGGATATCTGTGAATGATCTTGTAATAAAGGCTGCGGCTTTAGCTCTTCGAAAGGTTCCACAATGCAATAGTTCATGGACCGATGATTGTATTCGACAATACCACAACATAAATATTAATGTGGCCGTGCAGACTGATAATGGACTCTTTGTCCCTGTCATCTTGGATGCTGACAAGAAAGGTTTGTCCAAGATAGGTGAAGAGGTCAAGGAATTAGCCCAGAAAGCAAAAAGTAACAGCTTAAAACCAGAAGATTATGAGTTGCAGGGAGGCACATTTACAGTCTCGAACTTGGGCGGGCCATTTGGAATCAAGCAATTTTGTGCTATCATAAACCCTCCACAATCCGGCATTCTTGCTATTGGATCTGCCGAGAAGAGGGTCGTACCCGGGTCGGGTTCTGAAGACTTCCAATTTGCTTCTTTTATGTCTGCAACATTGAGTTGCGATCATCGTGTAATTGATGGTGCAATTGGTGCTGAGTGGCTGAAAGCTTTCAAAGGGTATATCGAGAATCCCGAATCGATGCTGTTATAA 1290 43.88 MPSLSPTMTEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIICGDGAKEIKVGEVIAITVEDEEDIAKFNDYKPGSSSTDAAPAKESSSPPKKEVVDEPVQSPPEPKTPKLSSSPPVGDRIFASPLARTLAEKENVSLSNIKGTGPDGTIVKADVEEYLASRGKDTSVAAAASKSKGAAPASLDYTDIPHSQIRKVTASRLLFSKQTIPHYYLTVDARVDKLMDLRNQLNSLQEASGGKRISVNDLVIKAAALALRKVPQCNSSWTDDCIRQYHNININVAVQTDNGLFVPVILDADKKGLSKIGEEVKELAQKAKSNSLKPEDYELQGGTFTVSNLGGPFGIKQFCAIINPPQSGILAIGSAEKRVVPGSGSEDFQFASFMSATLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 429
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 775609 779565 - Bma013037.1 Bma15g00064 96186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma15g00064 429 Pfam 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 196 429 IPR001078 GO:0016746
Bma15g00064 429 TIGRFAM PDHac_trf_mito: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase 1 429 IPR006257 GO:0004742|GO:0006090|GO:0045254
Bma15g00064 429 SUPERFAMILY CoA-dependent acyltransferases 196 429 - -
Bma15g00064 429 ProSitePatterns 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 21 50 IPR003016 -
Bma15g00064 429 Coils Coil 227 247 - -
Bma15g00064 429 MobiDBLite consensus disorder prediction 81 130 - -
Bma15g00064 429 PANTHER DIHYDROLIPOAMIDE ACETYLTRANSFERASE COMPONENT OF PYRUVATE DEHYDROGENASE COMPLEX 1 429 - -
Bma15g00064 429 Gene3D - 1 97 - -
Bma15g00064 429 Gene3D - 129 179 IPR036625 GO:0016746
Bma15g00064 429 CDD lipoyl_domain 1 70 - -
Bma15g00064 429 ProSiteProfiles Biotinyl/lipoyl domain profile. 1 72 IPR000089 -
Bma15g00064 429 Gene3D - 180 427 IPR023213 -
Bma15g00064 429 PANTHER DIHYDROLIPOYLLYSINE-RESIDUE ACETYLTRANSFERASE COMPONENT 3 OF PYRUVATE DEHYDROGENASE COMPLEX, MITOCHONDRIAL 1 429 - -
Bma15g00064 429 SUPERFAMILY Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 130 172 IPR036625 GO:0016746
Bma15g00064 429 Pfam Biotin-requiring enzyme 1 70 IPR000089 -
Bma15g00064 429 ProSiteProfiles Peripheral subunit-binding (PSBD) domain profile. 134 171 IPR004167 GO:0016746
Bma15g00064 429 Pfam e3 binding domain 133 168 IPR004167 GO:0016746
Bma15g00064 429 SUPERFAMILY Single hybrid motif 1 89 IPR011053 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma14g01908 Bma15g00064 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma14g01732 Bma-Chr14:37214347 Bma15g00064 Bma-Chr15:775609 0 dispersed
Bma15g00064 Bma-Chr15:775609 Bma01g02546 Bma-Chr1:83126792 2.59E-51 transposed
Bma15g00064 Bma-Chr15:775609 Bma04g00397 Bma-Chr4:3242052 1.16E-51 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma15g00064 K00627 - csv:101203257 713.375