Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma15g00074 ATGGCTTTTGCTCCTGTGTCTCATCATCCCACTCGTGGTCACCATGCAGAGTTTGCAACTGATGCTCTGTACAAGGAATTATGGCATGCTTGTGCAGGCCCACTCGTCACCCTTCCTCATGAAGGGGAGCGTGTTTATTACTTTCCACAAGGTCATATGGAACAGCTAGAAGCGTCAATGCATCAAGGGCTAGAGCAGCAGATGCCTTCTTTCAATCTGCGGTCAAAAATACTTTGTAAAGTCGTCAATGTTAGCCTTCGTGCTGAACCCGACACAGATGAAGTTTATGCGCAAATAGCTTTGCTTCCTGATAGAGATCAAAATGAAGTAACGAGCCCTGATCCACCTGTCCTTGAGCCTCCTAGATGCACCGTCCATTCATTTTGCAAGACACTTACTGCTTCTGATACTAGCACACACGGCGGCTTCTCTGTTCTGAGGAGGCATGCAGATGATTGTCTGCCACCATTGGATATGTTGCAGCAGCCACCATGGCAAGAATTGGTTGCTACTGATTTGCATAAAAATGAATGGCATTTCAGGCACATTTTTCGAGGTCAGCCTAGGCGCCATTTATTAACAACTGGGTGGAGTGTCTTTGTTAGTTCCAAGAAGTTGGTAGCTGGTGACGCCTTCATATTTCTAAGAGGGGAGAATGGGGAGCTTCGTGTGGGAGTGAGGCGGCTCATGAGACAGCTGAACAACATGCCCTCTTCCGTTATCTCAAGTCACAGCATGCATGTTGGAGTTCTTGCTACTGCATCTCATGCCGTTGCTACTGGAACACTATTTTCCGTATTTTACAAACCAAGAACAAGTAGGTCTGAATTCATTGTAAATCTGAACAAGTACCTTGAAGCTCAAAGCCACAAGCTTTCCGTTGGGATGAGGTTTAAGATGAGATTTGAGGGGGAGGAAGTTCCTGAAAGAAGGTTCAGTGGCACGATTGTTGGTGTTGGAGATAGTATATCATCTGGGTGGGTTGATTCTGAGTGGCGATCTTTAAAGGTTCAATGGGATGAACCTTCATCCATCTTACGTCCAGAACGAGTTTCACCTTGGGAATTGGAGCCTCTTGTTCCAACTAATCCACCAAGCTGCCAGCAAACACAAAGAAGCAAGCGTGCACGACCTGCTGTTTTATCTTCCCCTGCACCAGAGATATCTGTGCTTGGTGGATGGAAACCTCCAATTGAATCTCCTACCATTTCATATTCCAATCCACAGCGAGCAAAGGAGGTCTACCTATCTCCAAAGTTCAGCTCTACTGCAATTGCAAGCTCTTTTGGCTTTAATCGAAATGGCTCTTTTGGTTCAATTTCCAACAAATCATTGCATTGGACTAATCAGGTGGAATCTGTTACAGAATCTTTTTCCCCACTTGCTAACAACGAAGCGGCAGAAAAGAAGCAAAGTACTGGGAATGGATGCAGAATCTTTGGAATTGAGCTACTTGGCAATTCCACGATAGAAGATGCTTCACCTGCTACAGTTTCTAGGATGACAGTGGCTGATCGGCCTATTCCATCATTAGATACTGAATCTGACCAGCATTCTGAACCATCAAACGTTAATCGATCTGATATTCCTTCAGTGAGTTGTGATGCAGAAAAATCATGCCTGAGATCTCCGTATGATTCTCAGAGTAGGCAAATTCGTAGTTGCACAAAGGTTCACATGCAAGGGATTGCAGTAGGGAGGGCTGTGGACTTGACGCGATTTGATCGTTATGATGATCTGCTGAGGAAGCTGGAAGAGATGTTTGACATTGAAGGTGAGCTCCGGGGACATACAAAGAAATGGCGAGTTGTCTATACTGATGATGAGGATGACATGATGATGGTTGGGGATGATCCATGGCATGAGTTCTGCAGTATGGTGAGGAAGATCTTCATCTACACAACGGAGGAAGTAAAGAGATTGTCTCCAAAGATAAAACTTGCAGCCAGCGACGATGCTAAGCCAAGAAATCCAGATATTGAAATAGCCATCAACACCGAGGACAAATCCTTGGCTCCCGGATGCCAATGA 2031 45.3 MAFAPVSHHPTRGHHAEFATDALYKELWHACAGPLVTLPHEGERVYYFPQGHMEQLEASMHQGLEQQMPSFNLRSKILCKVVNVSLRAEPDTDEVYAQIALLPDRDQNEVTSPDPPVLEPPRCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMLQQPPWQELVATDLHKNEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHSMHVGVLATASHAVATGTLFSVFYKPRTSRSEFIVNLNKYLEAQSHKLSVGMRFKMRFEGEEVPERRFSGTIVGVGDSISSGWVDSEWRSLKVQWDEPSSILRPERVSPWELEPLVPTNPPSCQQTQRSKRARPAVLSSPAPEISVLGGWKPPIESPTISYSNPQRAKEVYLSPKFSSTAIASSFGFNRNGSFGSISNKSLHWTNQVESVTESFSPLANNEAAEKKQSTGNGCRIFGIELLGNSTIEDASPATVSRMTVADRPIPSLDTESDQHSEPSNVNRSDIPSVSCDAEKSCLRSPYDSQSRQIRSCTKVHMQGIAVGRAVDLTRFDRYDDLLRKLEEMFDIEGELRGHTKKWRVVYTDDEDDMMMVGDDPWHEFCSMVRKIFIYTTEEVKRLSPKIKLAASDDAKPRNPDIEIAINTEDKSLAPGCQ 676
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 857350 865806 + Bma013047.2 Bma15g00074 96196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma15g00074 676 ProSiteProfiles PB1 domain profile. 553 646 IPR000270 GO:0005515
Bma15g00074 676 MobiDBLite consensus disorder prediction 508 530 - -
Bma15g00074 676 Gene3D - 548 642 - -
Bma15g00074 676 MobiDBLite consensus disorder prediction 514 530 - -
Bma15g00074 676 Pfam AUX/IAA family 600 643 IPR033389 -
Bma15g00074 676 Pfam AUX/IAA family 551 589 IPR033389 -
Bma15g00074 676 Pfam Auxin response factor 254 336 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Bma15g00074 676 Pfam B3 DNA binding domain 128 228 IPR003340 GO:0003677
Bma15g00074 676 SUPERFAMILY CAD & PB1 domains 554 630 - -
Bma15g00074 676 Gene3D - 125 230 IPR015300 -
Bma15g00074 676 CDD B3_DNA 126 228 IPR003340 GO:0003677
Bma15g00074 676 Gene3D - 291 362 - -
Bma15g00074 676 SUPERFAMILY DNA-binding pseudobarrel domain 117 257 IPR015300 -
Bma15g00074 676 ProSiteProfiles B3 DNA-binding domain profile. 128 230 IPR003340 GO:0003677
Bma15g00074 676 SMART B3_2 128 230 IPR003340 GO:0003677
Bma15g00074 676 MobiDBLite consensus disorder prediction 357 381 - -
Bma15g00074 676 PANTHER AUXIN RESPONSE FACTOR 9 9 656 - -
Bma15g00074 676 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 9 656 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bma15g00074 676 MobiDBLite consensus disorder prediction 362 377 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g00914 Bma-Chr4:12549926 Bma15g00074 Bma-Chr15:857350 2.51E-129 dispersed
Bma06g00284 Bma-Chr6:4006564 Bma15g00074 Bma-Chr15:857350 7.05E-41 dispersed
Bma09g00713 Bma-Chr9:45190259 Bma15g00074 Bma-Chr15:857350 1.96E-29 dispersed
Bma11g00175 Bma-Chr11:1567754 Bma15g00074 Bma-Chr15:857350 8.01E-73 dispersed
Bma14g00953 Bma-Chr14:10844578 Bma15g00074 Bma-Chr15:857350 2.02E-11 dispersed
Bma15g00074 Bma-Chr15:857350 Bma14g01118 Bma-Chr14:14107748 6.66E-14 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58450 PF02362 B3 9.70E-19 CL0405 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma15g00074 K14486 - zju:107431430 1085.86