Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma15g00077 ATGGACGGGAGTTGCACTGATGAAAGCACGGCGAGTGAATCCACCTCTATTTCTCCTGTGACTCCGCTGGCTTTTCTGGCTACTAAGGGCTCTTCCCCGCCGGAGGCTCGGTGCCGTATGGGCGCCGGAACGAGTGTCGTTGTCCACTCCGATCAGTCGTGCGGTGTGGAAGCGGAGTCAAGAAAGCTCCCCTCCTCCAGGTTCAAAGGGGTGGTGCCGCAGCCCAATGGGCGGTGGGGGGCGCAGATTTATGAAAAGCACCAACGGGTCTGGCTCGGCACTTTTAACGAGGAGGACGAGGCAGCCCGAGCGTACGATGTCGCCGCTCAAAGATTCCGCGGCCGCGATGCTGTCACCAATTTCAAGCCGCTTGCCGACACTGCCGACGACGACGTCGAGTTGGAGTTTCTCAATTCCCATTCGAAATCCGAGATCGTTGATATGCTACGTAAGCATACCTACAGCGATGAACTGCAGCAGAGCAAACGTAGAAATGGGTTACTAAACGGCTATGGCAACCGAACAAGAGCCGTTGGCCTAACCGGCGCCGGACAGGACAATGATTCCAAGGAACGTGAGTTGCTTTTCGAAAAGGGGGTGACCCCTAGCGACGTCGGAAAATTGAACCGTCTAGTGATCCCCAAGCAATATGCCGAGAAGCACTTCCCGTTGCAGAGCGGCGCCGCCTCATCCAAAGGCATCCTTCTCAACTTCGAGGATGTTGGAGGAAAAGTATGGCGGTTCCGCTACTCGTATTGGAACAGCAGCCAAAGCTACGTTCTAACAAAAGGGTGGAGCCGATTCGTCAAGGAGAAGAACCTCCATGCTGGAGACATAGTCAGCTTCCTCCGATCTACCGGACCGGAGAAACAGCTGTACATTGACTTCAAGGATCGGAATGGACGGGCGGTGGTGGCTGGATTTTCGAACCCAAAGCCACCGGTTCAGATAGTGAGACTATTTGGGGTGAATATTTTCAAAGTACCTGGAAATGGTATTGGTAGTCTAGATAGCGCCGCCTCAACTGGTGGCTGCCATGGGAAGAGAATAAGAGATCAAGTAGAGCTTATAGGTTTAGAGTACAGTAAAAAGCAAAGGGTAATCGGAGCTCTGTAA 1116 53.41 MDGSCTDESTASESTSISPVTPLAFLATKGSSPPEARCRMGAGTSVVVHSDQSCGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKPLADTADDDVELEFLNSHSKSEIVDMLRKHTYSDELQQSKRRNGLLNGYGNRTRAVGLTGAGQDNDSKERELLFEKGVTPSDVGKLNRLVIPKQYAEKHFPLQSGAASSKGILLNFEDVGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLHAGDIVSFLRSTGPEKQLYIDFKDRNGRAVVAGFSNPKPPVQIVRLFGVNIFKVPGNGIGSLDSAASTGGCHGKRIRDQVELIGLEYSKKQRVIGAL 371
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 893677 894792 - Bma013051.1 Bma15g00077 96199

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bma15g00077 371 Pfam B3 DNA binding domain 196 298 IPR003340 GO:0003677
Bma15g00077 371 Pfam AP2 domain 67 114 IPR001471 GO:0003700|GO:0006355
Bma15g00077 371 PANTHER PROTEIN RAV1, PUTATIVE-RELATED 1 371 - -
Bma15g00077 371 Gene3D AP2/ERF domain 66 123 IPR036955 GO:0003700|GO:0006355
Bma15g00077 371 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 1 371 IPR044800 GO:0003700
Bma15g00077 371 SMART rav1_2 67 128 IPR001471 GO:0003700|GO:0006355
Bma15g00077 371 SUPERFAMILY DNA-binding pseudobarrel domain 193 298 IPR015300 -
Bma15g00077 371 SMART B3_2 196 300 IPR003340 GO:0003677
Bma15g00077 371 Gene3D - 184 306 IPR015300 -
Bma15g00077 371 CDD AP2 66 121 IPR001471 GO:0003700|GO:0006355
Bma15g00077 371 MobiDBLite consensus disorder prediction 1 22 - -
Bma15g00077 371 ProSiteProfiles B3 DNA-binding domain profile. 196 300 IPR003340 GO:0003677
Bma15g00077 371 CDD B3_DNA 195 282 IPR003340 GO:0003677
Bma15g00077 371 MobiDBLite consensus disorder prediction 1 34 - -
Bma15g00077 371 ProSiteProfiles AP2/ERF domain profile. 67 122 IPR001471 GO:0003700|GO:0006355
Bma15g00077 371 SUPERFAMILY DNA-binding domain 66 122 IPR016177 GO:0003677
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma15g00077 K09287 RAV; RAV-like factor - pvy:116107511 492.271
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bma01g00157 Bma15g00077 CCT
Bma01g00157 Bma15g00077 ECH
Bma14g01697 Bma15g00077 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00157 Bma-Chr1:1471963 Bma15g00077 Bma-Chr15:893677 4.11E-155 dispersed
Bma11g00635 Bma-Chr11:10967369 Bma15g00077 Bma-Chr15:893677 8.31E-53 dispersed
Bma14g01697 Bma-Chr14:36122169 Bma15g00077 Bma-Chr15:893677 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g266 . . Bda01g02092 . . Bpe10g00947 Bma14g01697 Bma15g00077 . Cmo18g01060 . Cma18g01042 . Car18g00968 Sed06g1865 Cpe09g00275 Cpe01g01766 Bhi07g01368 Tan04g0897 Cmetu10g0653 Lac13g0460 Hepe01g1220 . . Cla05g02328 Cam05g2502 Cec05g2525 Cco05g2568 Clacu05g2496 Cmu05g2358 Cre05g2474 Cone13ag0853 Cone19ag0854 Cone6ag0468 Cone9ag0480 Lsi04g00288 Csa05g02582 Chy10g01117 Cme10g00289 Blo06g00971 Blo11g00830 Bda07g01526 . Bpe11g01690 Bpe02g02282 Bma01g00157 . . . Cmo15g01051 Cma04g02012 Cma15g00991 . . . . . . . . . . . . . . . . . . . . Chy09g00618 .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bma14g01697 BCT,CCT,ECH 1 370 B3 DNA Binding Superfamily AT1G25560 61.2 1.0e-111 400.2
Bma15g00077 BCT,CCT,ECH 1 371 B3 DNA Binding Superfamily AT1G25560 58.9 2.3e-106 382.5
Bma01g00157 CCT,ECH 1 343 B3 DNA Binding Superfamily AT1G25560 56.8 2.2e-101 365.9
Bma14g00089 BCT 88 208 B3 DNA Binding Superfamily AT1G25560 61.2 2.0e-38 156.8
Bma07g01046 BCT 60 216 B3 DNA Binding Superfamily AT1G25560 51.1 4.5e-38 155.6
Bma05g01206 BCT,CCT,ECH 11 156 B3 DNA Binding Superfamily AT1G25560 50.9 2.9e-37 152.9
Bma14g00089 BCT 87 338 B3 DNA Binding Superfamily AT1G01030 50.6 5.2e-57 218.4
Bma04g00935 BCT,CCT,ECH 109 339 B3 DNA Binding Superfamily AT1G01030 51.4 1.5e-56 216.9
Bma06g01360 CCT,ECH 62 198 B3 DNA Binding Superfamily AT1G01030 60.1 2.8e-42 169.5
Bma15g00077 BCT,CCT,ECH 191 325 B3 DNA Binding Superfamily AT1G01030 60.9 2.4e-38 156.4
Bma14g01697 BCT,CCT,ECH 191 335 B3 DNA Binding Superfamily AT1G01030 54.1 1.6e-37 153.7
Bma01g01923 BCT 14 666 B3 DNA Binding Superfamily AT4G30080 58.1 2.2e-208 722.2
Bma04g00608 BCT 10 645 B3 DNA Binding Superfamily AT4G30080 58.1 2.0e-201 699.1
Bma11g00175 . 1 637 B3 DNA Binding Superfamily AT4G30080 54.2 2.3e-189 659.1
Bma03g00079 CCT,ECH 2 464 B3 DNA Binding Superfamily AT4G30080 51.2 9.5e-143 504.2
Bma04g01367 . 3 481 B3 DNA Binding Superfamily AT2G30470 59.7 1.9e-150 530.0
Bma04g01367 . 1 582 B3 DNA Binding Superfamily AT4G32010 54.2 2.0e-160 563.1
Bma03g00530 CCT 1 394 B3 DNA Binding Superfamily AT3G18990 52.4 8.6e-101 364.0
Bma15g00074 . 20 650 B3 DNA Binding Superfamily AT1G59750 72.2 1.8e-258 888.6
Bma07g00773 . 23 383 B3 DNA Binding Superfamily AT1G59750 54.1 4.1e-106 382.5
Bma07g00655 . 27 398 B3 DNA Binding Superfamily AT1G59750 52.5 1.3e-104 377.5
Bma14g01118 CCT 24 384 B3 DNA Binding Superfamily AT1G59750 54.1 6.6e-104 375.2
Bma04g00238 BCT 36 377 B3 DNA Binding Superfamily AT1G59750 52.5 8.3e-99 358.2
Bma06g01012 BCT 9 358 B3 DNA Binding Superfamily AT1G59750 51.0 2.4e-98 356.7
Bma01g02358 BCT 44 377 B3 DNA Binding Superfamily AT1G59750 52.8 2.7e-97 353.2
Bma01g00269 BCT 45 320 B3 DNA Binding Superfamily AT1G59750 50.9 3.5e-73 273.1
Bma11g00175 . 6 631 B3 DNA Binding Superfamily AT2G28350 59.0 1.6e-198 689.5
Bma01g01923 BCT 13 666 B3 DNA Binding Superfamily AT2G28350 55.3 2.2e-195 679.1
Bma04g00608 BCT 9 645 B3 DNA Binding Superfamily AT2G28350 56.5 9.4e-191 663.7
Bma03g00079 CCT,ECH 7 373 B3 DNA Binding Superfamily AT2G28350 61.1 4.3e-135 478.8
Bma15g00074 . 13 648 B3 DNA Binding Superfamily AT2G46530 52.3 1.3e-162 570.1
Bma14g01118 CCT 15 368 B3 DNA Binding Superfamily AT2G46530 52.4 4.8e-96 349.0
Bma07g00773 . 1 359 B3 DNA Binding Superfamily AT2G46530 51.4 9.0e-95 344.7
Bma01g02358 BCT 43 377 B3 DNA Binding Superfamily AT2G46530 50.9 4.9e-93 339.0
Bma04g00238 BCT 43 377 B3 DNA Binding Superfamily AT2G46530 50.3 2.7e-91 333.2
Bma07g00655 . 16 373 B3 DNA Binding Superfamily AT2G46530 50.7 1.0e-90 331.3
Bma01g01923 BCT 14 666 B3 DNA Binding Superfamily AT4G30080 58.1 2.2e-208 722.2
Bma04g00608 BCT 10 645 B3 DNA Binding Superfamily AT4G30080 58.1 2.0e-201 699.1
Bma11g00175 . 1 637 B3 DNA Binding Superfamily AT4G30080 54.2 2.3e-189 659.1
Bma03g00079 CCT,ECH 2 464 B3 DNA Binding Superfamily AT4G30080 51.2 9.5e-143 504.2
Bma15g00074 . 53 650 B3 DNA Binding Superfamily AT3G61830 51.2 2.1e-151 532.7
Bma04g00914 . 1 480 B3 DNA Binding Superfamily AT3G61830 50.5 1.9e-120 429.9
Bma14g01118 CCT 52 365 B3 DNA Binding Superfamily AT3G61830 52.4 4.4e-85 312.4
Bma14g00953 . 51 363 B3 DNA Binding Superfamily AT3G61830 51.9 2.8e-84 309.7
Bma07g00773 . 51 368 B3 DNA Binding Superfamily AT3G61830 51.9 3.7e-84 309.3
Bma06g01012 BCT 1 1090 B3 DNA Binding Superfamily AT1G19220 61.9 0.0e+00 1102.0
Bma01g00269 BCT 23 990 B3 DNA Binding Superfamily AT1G19220 54.6 2.6e-275 945.3
Bma07g00655 . 1 1062 B3 DNA Binding Superfamily AT1G19220 50.9 4.5e-243 838.2
Bma14g00953 . 1 402 B3 DNA Binding Superfamily AT1G19220 64.7 1.3e-146 517.7
Bma04g00238 BCT 38 377 B3 DNA Binding Superfamily AT1G19220 70.7 7.7e-142 501.9
Bma15g00074 . 23 360 B3 DNA Binding Superfamily AT1G19220 52.9 1.7e-96 351.3
Bma04g00914 . 2 196 B3 DNA Binding Superfamily AT1G19220 50.5 6.0e-54 209.9
Bma15g00074 . 23 227 B3 DNA Binding Superfamily AT1G43950 50.7 7.2e-55 210.7
Bma07g00402 . 145 431 B3 DNA Binding Superfamily AT2G33860 66.0 9.1e-105 377.5
Bma11g00426 BCT,CCT 144 444 B3 DNA Binding Superfamily AT2G33860 64.2 3.2e-102 369.0
Bma07g00399 BCT,CCT 145 449 B3 DNA Binding Superfamily AT2G33860 62.4 9.4e-102 367.5
Bma07g00137 . 75 322 B3 DNA Binding Superfamily AT2G33860 51.4 3.4e-75 279.3
Bma14g01118 CCT 128 359 B3 DNA Binding Superfamily AT2G33860 56.9 1.2e-72 270.8
Bma07g00773 . 127 358 B3 DNA Binding Superfamily AT2G33860 56.9 2.5e-70 263.1
Bma06g01012 BCT 126 356 B3 DNA Binding Superfamily AT2G33860 54.5 8.0e-69 258.1
Bma07g00655 . 131 362 B3 DNA Binding Superfamily AT2G33860 56.0 1.8e-68 256.9
Bma01g02358 BCT 147 382 B3 DNA Binding Superfamily AT2G33860 54.2 8.9e-68 254.6
Bma04g00238 BCT 147 382 B3 DNA Binding Superfamily AT2G33860 54.2 8.9e-68 254.6
Bma14g00953 . 127 357 B3 DNA Binding Superfamily AT2G33860 55.2 3.4e-67 252.7
Bma07g00137 . 26 651 B3 DNA Binding Superfamily AT5G60450 53.7 3.5e-181 632.1
Bma04g00238 BCT 40 382 B3 DNA Binding Superfamily AT5G60450 51.4 1.7e-95 347.4
Bma07g00655 . 18 380 B3 DNA Binding Superfamily AT5G60450 50.4 6.5e-95 345.5
Bma01g02358 BCT 13 933 B3 DNA Binding Superfamily AT1G19850 59.0 2.1e-278 955.3
Bma04g00238 BCT 8 565 B3 DNA Binding Superfamily AT1G19850 66.7 4.3e-207 718.4
Bma15g00074 . 23 357 B3 DNA Binding Superfamily AT1G19850 54.4 3.2e-101 366.7
Bma04g00914 . 2 196 B3 DNA Binding Superfamily AT1G19850 55.8 4.3e-58 223.4
Bma07g00773 . 1 881 B3 DNA Binding Superfamily AT1G30330 68.4 0.0e+00 1181.0
Bma14g00953 . 1 777 B3 DNA Binding Superfamily AT1G30330 59.5 2.3e-275 945.3
Bma14g01118 CCT 1 809 B3 DNA Binding Superfamily AT1G30330 59.5 6.4e-262 900.6
Bma04g00238 BCT 32 415 B3 DNA Binding Superfamily AT1G30330 63.0 4.7e-140 495.7
Bma11g00910 . 1 491 B3 DNA Binding Superfamily AT1G30330 50.2 1.1e-120 431.4
Bma15g00074 . 23 359 B3 DNA Binding Superfamily AT1G30330 55.6 3.9e-102 369.8
Bma04g00914 . 2 196 B3 DNA Binding Superfamily AT1G30330 55.8 3.5e-58 223.8
Bma06g01012 BCT 1 1077 B3 DNA Binding Superfamily AT5G20730 58.8 2.1e-291 998.8
Bma01g00269 BCT 23 977 B3 DNA Binding Superfamily AT5G20730 50.4 4.9e-256 881.3
Bma07g00773 . 4 498 B3 DNA Binding Superfamily AT5G20730 58.7 5.4e-154 542.3
Bma14g01118 CCT 16 488 B3 DNA Binding Superfamily AT5G20730 57.9 2.2e-147 520.4
Bma14g00953 . 4 364 B3 DNA Binding Superfamily AT5G20730 68.1 4.0e-141 499.6
Bma04g00238 BCT 38 414 B3 DNA Binding Superfamily AT5G20730 65.5 9.9e-140 495.0
Bma15g00074 . 6 360 B3 DNA Binding Superfamily AT5G20730 51.8 6.1e-97 352.8
Bma04g00914 . 2 196 B3 DNA Binding Superfamily AT5G20730 50.8 1.3e-54 212.2
Bma14g01118 CCT 98 812 B3 DNA Binding Superfamily AT5G37020 66.9 1.6e-257 885.6
Bma07g00773 . 97 844 B3 DNA Binding Superfamily AT5G37020 53.9 2.2e-198 689.1
Bma14g00953 . 97 737 B3 DNA Binding Superfamily AT5G37020 52.2 2.6e-178 622.5
Bma06g01012 BCT 106 420 B3 DNA Binding Superfamily AT5G37020 61.3 1.5e-106 384.0
Bma04g00238 BCT 118 399 B3 DNA Binding Superfamily AT5G37020 64.6 3.9e-102 369.4
Bma07g00402 . 135 376 B3 DNA Binding Superfamily AT5G37020 51.0 8.0e-63 238.8
Bma04g00914 . 6 196 B3 DNA Binding Superfamily AT5G37020 54.4 1.5e-56 218.0
Bma15g00074 . 16 647 B3 DNA Binding Superfamily AT4G23980 51.8 5.8e-166 581.3
Bma07g00655 . 27 382 B3 DNA Binding Superfamily AT4G23980 50.7 8.3e-96 348.2
Bma04g00238 BCT 40 377 B3 DNA Binding Superfamily AT5G62000 54.5 2.9e-104 376.7
Bma06g01012 BCT 9 375 B3 DNA Binding Superfamily AT5G62000 52.0 1.6e-102 370.9
Bma01g00269 BCT 45 317 B3 DNA Binding Superfamily AT5G62000 51.6 8.9e-77 285.4
Bma04g01367 . 3 481 B3 DNA Binding Superfamily AT2G30470 59.7 1.9e-150 530.0
Bma04g01367 . 1 582 B3 DNA Binding Superfamily AT4G32010 54.2 2.0e-160 563.1
Bma06g01012 BCT 1 1090 B3 DNA Binding Superfamily AT1G19220 61.9 0.0e+00 1102.0
Bma01g00269 BCT 23 990 B3 DNA Binding Superfamily AT1G19220 54.6 2.6e-275 945.3
Bma07g00655 . 1 1062 B3 DNA Binding Superfamily AT1G19220 50.9 4.5e-243 838.2
Bma14g00953 . 1 402 B3 DNA Binding Superfamily AT1G19220 64.7 1.3e-146 517.7
Bma04g00238 BCT 38 377 B3 DNA Binding Superfamily AT1G19220 70.7 7.7e-142 501.9
Bma15g00074 . 23 360 B3 DNA Binding Superfamily AT1G19220 52.9 1.7e-96 351.3
Bma04g00914 . 2 196 B3 DNA Binding Superfamily AT1G19220 50.5 6.0e-54 209.9
Bma01g02358 BCT 13 933 B3 DNA Binding Superfamily AT1G19850 59.0 2.1e-278 955.3
Bma04g00238 BCT 8 565 B3 DNA Binding Superfamily AT1G19850 66.7 4.3e-207 718.4
Bma15g00074 . 23 357 B3 DNA Binding Superfamily AT1G19850 54.4 3.2e-101 366.7
Bma04g00914 . 2 196 B3 DNA Binding Superfamily AT1G19850 55.8 4.3e-58 223.4
Bma07g00773 . 1 881 B3 DNA Binding Superfamily AT1G30330 68.4 0.0e+00 1181.0
Bma14g00953 . 1 777 B3 DNA Binding Superfamily AT1G30330 59.5 2.3e-275 945.3
Bma14g01118 CCT 1 809 B3 DNA Binding Superfamily AT1G30330 59.5 6.4e-262 900.6
Bma04g00238 BCT 32 415 B3 DNA Binding Superfamily AT1G30330 63.0 4.7e-140 495.7
Bma11g00910 . 1 491 B3 DNA Binding Superfamily AT1G30330 50.2 1.1e-120 431.4
Bma15g00074 . 23 359 B3 DNA Binding Superfamily AT1G30330 55.6 3.9e-102 369.8
Bma04g00914 . 2 196 B3 DNA Binding Superfamily AT1G30330 55.8 3.5e-58 223.8
Bma06g01012 BCT 1 1077 B3 DNA Binding Superfamily AT5G20730 58.8 2.1e-291 998.8
Bma01g00269 BCT 23 977 B3 DNA Binding Superfamily AT5G20730 50.4 4.9e-256 881.3
Bma07g00773 . 4 498 B3 DNA Binding Superfamily AT5G20730 58.7 5.4e-154 542.3
Bma14g01118 CCT 16 488 B3 DNA Binding Superfamily AT5G20730 57.9 2.2e-147 520.4
Bma14g00953 . 4 364 B3 DNA Binding Superfamily AT5G20730 68.1 4.0e-141 499.6
Bma04g00238 BCT 38 414 B3 DNA Binding Superfamily AT5G20730 65.5 9.9e-140 495.0
Bma15g00074 . 6 360 B3 DNA Binding Superfamily AT5G20730 51.8 6.1e-97 352.8
Bma04g00914 . 2 196 B3 DNA Binding Superfamily AT5G20730 50.8 1.3e-54 212.2
Bma14g01118 CCT 98 812 B3 DNA Binding Superfamily AT5G37020 66.9 1.6e-257 885.6
Bma07g00773 . 97 844 B3 DNA Binding Superfamily AT5G37020 53.9 2.2e-198 689.1
Bma14g00953 . 97 737 B3 DNA Binding Superfamily AT5G37020 52.2 2.6e-178 622.5
Bma06g01012 BCT 106 420 B3 DNA Binding Superfamily AT5G37020 61.3 1.5e-106 384.0
Bma04g00238 BCT 118 399 B3 DNA Binding Superfamily AT5G37020 64.6 3.9e-102 369.4
Bma07g00402 . 135 376 B3 DNA Binding Superfamily AT5G37020 51.0 8.0e-63 238.8
Bma04g00914 . 6 196 B3 DNA Binding Superfamily AT5G37020 54.4 1.5e-56 218.0
Bma07g00402 . 145 431 B3 DNA Binding Superfamily AT2G33860 66.0 9.1e-105 377.5
Bma11g00426 BCT,CCT 144 444 B3 DNA Binding Superfamily AT2G33860 64.2 3.2e-102 369.0
Bma07g00399 BCT,CCT 145 449 B3 DNA Binding Superfamily AT2G33860 62.4 9.4e-102 367.5
Bma07g00137 . 75 322 B3 DNA Binding Superfamily AT2G33860 51.4 3.4e-75 279.3
Bma14g01118 CCT 128 359 B3 DNA Binding Superfamily AT2G33860 56.9 1.2e-72 270.8
Bma07g00773 . 127 358 B3 DNA Binding Superfamily AT2G33860 56.9 2.5e-70 263.1
Bma06g01012 BCT 126 356 B3 DNA Binding Superfamily AT2G33860 54.5 8.0e-69 258.1
Bma07g00655 . 131 362 B3 DNA Binding Superfamily AT2G33860 56.0 1.8e-68 256.9
Bma01g02358 BCT 147 382 B3 DNA Binding Superfamily AT2G33860 54.2 8.9e-68 254.6
Bma04g00238 BCT 147 382 B3 DNA Binding Superfamily AT2G33860 54.2 8.9e-68 254.6
Bma14g00953 . 127 357 B3 DNA Binding Superfamily AT2G33860 55.2 3.4e-67 252.7
Bma07g00137 . 26 651 B3 DNA Binding Superfamily AT5G60450 53.7 3.5e-181 632.1
Bma04g00238 BCT 40 382 B3 DNA Binding Superfamily AT5G60450 51.4 1.7e-95 347.4
Bma07g00655 . 18 380 B3 DNA Binding Superfamily AT5G60450 50.4 6.5e-95 345.5
Bma15g00074 . 20 650 B3 DNA Binding Superfamily AT1G59750 72.2 1.8e-258 888.6
Bma07g00773 . 23 383 B3 DNA Binding Superfamily AT1G59750 54.1 4.1e-106 382.5
Bma07g00655 . 27 398 B3 DNA Binding Superfamily AT1G59750 52.5 1.3e-104 377.5
Bma14g01118 CCT 24 384 B3 DNA Binding Superfamily AT1G59750 54.1 6.6e-104 375.2
Bma04g00238 BCT 36 377 B3 DNA Binding Superfamily AT1G59750 52.5 8.3e-99 358.2
Bma06g01012 BCT 9 358 B3 DNA Binding Superfamily AT1G59750 51.0 2.4e-98 356.7
Bma01g02358 BCT 44 377 B3 DNA Binding Superfamily AT1G59750 52.8 2.7e-97 353.2
Bma01g00269 BCT 45 320 B3 DNA Binding Superfamily AT1G59750 50.9 3.5e-73 273.1
Bma04g00238 BCT 40 377 B3 DNA Binding Superfamily AT5G62000 54.5 2.9e-104 376.7
Bma06g01012 BCT 9 375 B3 DNA Binding Superfamily AT5G62000 52.0 1.6e-102 370.9
Bma01g00269 BCT 45 317 B3 DNA Binding Superfamily AT5G62000 51.6 8.9e-77 285.4
Bma15g00074 . 13 648 B3 DNA Binding Superfamily AT2G46530 52.3 1.3e-162 570.1
Bma14g01118 CCT 15 368 B3 DNA Binding Superfamily AT2G46530 52.4 4.8e-96 349.0
Bma07g00773 . 1 359 B3 DNA Binding Superfamily AT2G46530 51.4 9.0e-95 344.7
Bma01g02358 BCT 43 377 B3 DNA Binding Superfamily AT2G46530 50.9 4.9e-93 339.0
Bma04g00238 BCT 43 377 B3 DNA Binding Superfamily AT2G46530 50.3 2.7e-91 333.2
Bma07g00655 . 16 373 B3 DNA Binding Superfamily AT2G46530 50.7 1.0e-90 331.3
Bma15g00074 . 53 650 B3 DNA Binding Superfamily AT3G61830 51.2 2.1e-151 532.7
Bma04g00914 . 1 480 B3 DNA Binding Superfamily AT3G61830 50.5 1.9e-120 429.9
Bma14g01118 CCT 52 365 B3 DNA Binding Superfamily AT3G61830 52.4 4.4e-85 312.4
Bma14g00953 . 51 363 B3 DNA Binding Superfamily AT3G61830 51.9 2.8e-84 309.7
Bma07g00773 . 51 368 B3 DNA Binding Superfamily AT3G61830 51.9 3.7e-84 309.3
Bma15g00074 . 16 647 B3 DNA Binding Superfamily AT4G23980 51.8 5.8e-166 581.3
Bma07g00655 . 27 382 B3 DNA Binding Superfamily AT4G23980 50.7 8.3e-96 348.2
Bma15g00074 . 23 227 B3 DNA Binding Superfamily AT1G43950 50.7 7.2e-55 210.7
Bma11g00175 . 6 631 B3 DNA Binding Superfamily AT2G28350 59.0 1.6e-198 689.5
Bma01g01923 BCT 13 666 B3 DNA Binding Superfamily AT2G28350 55.3 2.2e-195 679.1
Bma04g00608 BCT 9 645 B3 DNA Binding Superfamily AT2G28350 56.5 9.4e-191 663.7
Bma03g00079 CCT,ECH 7 373 B3 DNA Binding Superfamily AT2G28350 61.1 4.3e-135 478.8
Bma01g01923 BCT 14 666 B3 DNA Binding Superfamily AT4G30080 58.1 2.2e-208 722.2
Bma04g00608 BCT 10 645 B3 DNA Binding Superfamily AT4G30080 58.1 2.0e-201 699.1
Bma11g00175 . 1 637 B3 DNA Binding Superfamily AT4G30080 54.2 2.3e-189 659.1
Bma03g00079 CCT,ECH 2 464 B3 DNA Binding Superfamily AT4G30080 51.2 9.5e-143 504.2
Bma14g00089 BCT 87 338 B3 DNA Binding Superfamily AT1G01030 50.6 5.2e-57 218.4
Bma04g00935 BCT,CCT,ECH 109 339 B3 DNA Binding Superfamily AT1G01030 51.4 1.5e-56 216.9
Bma06g01360 CCT,ECH 62 198 B3 DNA Binding Superfamily AT1G01030 60.1 2.8e-42 169.5
Bma15g00077 BCT,CCT,ECH 191 325 B3 DNA Binding Superfamily AT1G01030 60.9 2.4e-38 156.4
Bma14g01697 BCT,CCT,ECH 191 335 B3 DNA Binding Superfamily AT1G01030 54.1 1.6e-37 153.7
Bma14g01697 BCT,CCT,ECH 1 370 B3 DNA Binding Superfamily AT1G25560 61.2 1.0e-111 400.2
Bma15g00077 BCT,CCT,ECH 1 371 B3 DNA Binding Superfamily AT1G25560 58.9 2.3e-106 382.5
Bma01g00157 CCT,ECH 1 343 B3 DNA Binding Superfamily AT1G25560 56.8 2.2e-101 365.9
Bma14g00089 BCT 88 208 B3 DNA Binding Superfamily AT1G25560 61.2 2.0e-38 156.8
Bma07g01046 BCT 60 216 B3 DNA Binding Superfamily AT1G25560 51.1 4.5e-38 155.6
Bma05g01206 BCT,CCT,ECH 11 156 B3 DNA Binding Superfamily AT1G25560 50.9 2.9e-37 152.9
Bma04g00171 . 1 214 B3 DNA Binding Superfamily AT3G19184 54.1 9.6e-52 200.7
Bma04g00171 . 51 217 B3 DNA Binding Superfamily AT5G42700 60.4 5.0e-49 191.0
Bma03g00530 CCT 1 394 B3 DNA Binding Superfamily AT3G18990 52.4 8.6e-101 364.0
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001618 3 2 2 3 3 2 4 2 2 2 2 2 3 2 2 4 2 4 4 2 2 2 2 2 2 2 1 3 2 1 71
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58451 PF02362 B3 2.30E-27 CL0405 Bma TF
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bma15g00077 Bma_Chr15 FPKM 4.584848 6.31908 1.003839 1.482695 12.403374 12.151104 11.435549 1.015684 1.156451 1.412373