Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma15g00081 ATGTATTGCCAGAGCATTGGGGCCACAGAAATAGCTCACACGGGGACCGTCTGTTTGGACACAGGTCAGCAGTTTATGTACTCTAATGTGAACTTTGAGAACTGGGGTGATTCAGCAATGGCGGATACCAGCCAACAGACTGATACCTCCACTGATATTGAAAACGATGACAGAAACCAGTTTCAAGCCCATCATGGAGCAGTTGCTAATGTGGATTCCTTGGATCAATCTAAGCCAAAAGCTGGTGACCAAAAGACTCTTCGTCGGCTCGCGCAAAATCGCGAAGCAGCGAGGAAGAGTCGATTGAGGAAAAAGGCATATGTCCAGCAGCTGGAAACTAGTCAAGTTAAGCTTGCACAACTCGAGCAAGAGCTTCAACGCGCTCGCCAACAAGCAATGTTTACTTCAAATGGGTTTTCTGGAGAGCATGCTCCTTCGATTTCCAGCAACGTTCCATCAGGTGCATTGGCATTTGATGTGGACTATGCAAGATGGCTTGAAGACCACCAGAGGCTCATCAACGATCTTAGAGCGGCCGTTAATTCTCACATGGGCGACAACGAATTGCGATTTCTAGTCGATAGTATAATGACACATTACGACGAGGTATTCAGATTGAAGAGCATAGGCTCCAAACATGACGTATTTTACATGCTTTCCGGCATGTGGAAAACCCCGGCAGAGCGGTGTTTCATGTGGTTGGGTGGATTCCGATCGTCCGATATTCTCAAGATTCTTGGAAATCATCTCGAGCCTCTAACAGATCAACAGCTGATGGGAATATGTAATCTTCAGCAGTCTTCTCAGCAGGCAGAGGATGCCTTGTCACAAGGAATGGAAGCTTTGCAACAATCTCTTTTGGAAACGCTCACAGATTCGACCTCTCTCGGCCTGCCCGGGTCGGGAAATGTTTCCGACTACATGGGTCAAATGGTCATAGCAATGGAAAAGCTTGCCATCCTTGAGAACTTCATCCACCAGGCTGATCTTTTGAGGCAGCAAACCTTACAGCAGTTGCATCGAATCCTAACGCCTCGACAAGCAGCTCGAGCCCTTATGTGTATAAACGATTACAACTCGCGTCTTCGAGCTCTCAGTTCCTTATGGTTAGCACGGCCGAGAGACCTGAACTGA 1134 47.62 MYCQSIGATEIAHTGTVCLDTGQQFMYSNVNFENWGDSAMADTSQQTDTSTDIENDDRNQFQAHHGAVANVDSLDQSKPKAGDQKTLRRLAQNREAARKSRLRKKAYVQQLETSQVKLAQLEQELQRARQQAMFTSNGFSGEHAPSISSNVPSGALAFDVDYARWLEDHQRLINDLRAAVNSHMGDNELRFLVDSIMTHYDEVFRLKSIGSKHDVFYMLSGMWKTPAERCFMWLGGFRSSDILKILGNHLEPLTDQQLMGICNLQQSSQQAEDALSQGMEALQQSLLETLTDSTSLGLPGSGNVSDYMGQMVIAMEKLAILENFIHQADLLRQQTLQQLHRILTPRQAARALMCINDYNSRLRALSSLWLARPRDLN 377
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 916771 919101 + Bma013055.2 Bma15g00081 96203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma15g00081 377 Coils Coil 104 138 - -
Bma15g00081 377 Gene3D - 84 137 - -
Bma15g00081 377 CDD bZIP_HBP1b-like 85 136 - -
Bma15g00081 377 SUPERFAMILY Leucine zipper domain 85 129 IPR046347 GO:0003700|GO:0006355
Bma15g00081 377 SMART brlzneu 81 145 IPR004827 GO:0003700|GO:0006355
Bma15g00081 377 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 88 103 IPR004827 GO:0003700|GO:0006355
Bma15g00081 377 Pfam bZIP transcription factor 85 124 IPR004827 GO:0003700|GO:0006355
Bma15g00081 377 ProSiteProfiles DOG1 domain profile. 155 372 IPR025422 GO:0006351|GO:0043565
Bma15g00081 377 Pfam Seed dormancy control 173 246 IPR025422 GO:0006351|GO:0043565
Bma15g00081 377 PANTHER TRANSCRIPTION FACTOR TGA9 5 375 - -
Bma15g00081 377 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 83 127 IPR004827 GO:0003700|GO:0006355
Bma15g00081 377 PANTHER TRANSCRIPTION FACTOR PERIANTHIA 5 375 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g01459 Bma-Chr4:50090361 Bma15g00081 Bma-Chr15:916771 3.77E-154 dispersed
Bma10g00236 Bma-Chr10:2162224 Bma15g00081 Bma-Chr15:916771 2.71E-153 dispersed
Bma11g00226 Bma-Chr11:2012367 Bma15g00081 Bma-Chr15:916771 1.66E-110 dispersed
Bma14g00412 Bma-Chr14:4841704 Bma15g00081 Bma-Chr15:916771 2.25E-94 dispersed
Bma15g00081 Bma-Chr15:916771 Bma03g00419 Bma-Chr3:3186899 5.53E-155 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58452 PF14144 DOG1 4.10E-29 No_clan Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma15g00081 K14431 - tcc:18610523 526.939