Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma15g00097 | CAGCTGAGAATTTTGTCCAACAGTTTTGGGGTCCAAGCTGAGATTGATAAGATGACTGCTCAAGAAATTATGGACGCTAAAGCTCTTGCTGCTTCAAAGAGTCATAGCGAAGCTGAGAGAAGAAGAAGAGAGAGAATCAATAATCATCTTGCTAAGCTTCGAACTTTACTACCTAGCACCACCAAGACAGATAAAGCTTCACTACTAGCGGAGGTAATACAACACGTAAAAGAACTAAAGCGACAGACTTCGTTGATCGCCGAAACAAATCTAGTTCCGACTGAAAACGACGAGCTCACAGTCGATGCTTCCGACGATGACGGAAAGTTTGTAATCAGAGCGTCAATTTGCTGCGATGATCGGTCCGATCTTTTGCCCGACCTGATAAAAACCCTAAAATCACTCCGTTTAAGAACCCTAAAAGCGGAGATCACGACGATTGAAGGAAGAACGAAGAACGTGCTATTTATAACTGGAGACGACGATTCCAGTGGAGAGGGGGAAGAGCAGGAGCAGCTGTATTGTATAAGCTCAATTCAAGAAGCACTAAAGGCAGTAATGGAGAAGACAAGAGGGGATGATTCAAATAATCCTTCAACACTTGTTAAGAGGCAAAGAACCAGTAATGTCAATACCCTT | 639 | 43.19 | QLRILSNSFGVQAEIDKMTAQEIMDAKALAASKSHSEAERRRRERINNHLAKLRTLLPSTTKTDKASLLAEVIQHVKELKRQTSLIAETNLVPTENDELTVDASDDDGKFVIRASICCDDRSDLLPDLIKTLKSLRLRTLKAEITTIEGRTKNVLFITGDDDSSGEGEEQEQLYCISSIQEALKAVMEKTRGDDSNNPSTLVKRQRTSNVNTL | 213 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 1059794 | 1061389 | + | Bma030765 | Bma15g00097 | 96219 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma15g00097 | 213 | Gene3D | - | 24 | 89 | IPR036638 | GO:0046983 | |
Bma15g00097 | 213 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 34 | 86 | IPR036638 | GO:0046983 | |
Bma15g00097 | 213 | Pfam | Helix-loop-helix DNA-binding domain | 33 | 79 | IPR011598 | GO:0046983 | |
Bma15g00097 | 213 | MobiDBLite | consensus disorder prediction | 188 | 213 | - | - | |
Bma15g00097 | 213 | PANTHER | TRANSCRIPTION FACTOR BHLH30 | 7 | 212 | - | - | |
Bma15g00097 | 213 | MobiDBLite | consensus disorder prediction | 192 | 213 | - | - | |
Bma15g00097 | 213 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 30 | 79 | IPR011598 | GO:0046983 | |
Bma15g00097 | 213 | SMART | finulus | 36 | 85 | IPR011598 | GO:0046983 | |
Bma15g00097 | 213 | PANTHER | TRANSCRIPTION FACTOR BHLH30 | 7 | 212 | IPR045847 | GO:0003700|GO:0006355 | |
Bma15g00097 | 213 | CDD | ACT_UUR-ACR-like | 115 | 183 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma01g00151 | Bma-Chr1:1416665 | Bma15g00097 | Bma-Chr15:1059794 | 3.46E-110 | dispersed | |
Bma02g00111 | Bma-Chr2:1020575 | Bma15g00097 | Bma-Chr15:1059794 | 3.06E-37 | dispersed | |
Bma02g00175 | Bma-Chr2:1571563 | Bma15g00097 | Bma-Chr15:1059794 | 4.29E-39 | dispersed | |
Bma03g00178 | Bma-Chr3:1362116 | Bma15g00097 | Bma-Chr15:1059794 | 7.37E-27 | dispersed | |
Bma15g00097 | Bma-Chr15:1059794 | Bma12g00978 | Bma-Chr12:41848692 | 1.74E-10 | dispersed | |
Bma15g00097 | Bma-Chr15:1059794 | Bma04g00504 | Bma-Chr4:4436374 | 7.22E-53 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
58456 | PF00010 | HLH | 6.70E-13 | No_clan | Bma | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma15g00097 | - | - | jre:108993280 | 288.115 |