Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bma15g00129 | ATGGCATATTCTGGGGATTGTAAGAATAGAGAAGTGAGGATTCATGAGAGTTTGGATGAGCTCAGCACTGATCTGGCTGATCATATTGCCGAGTTATCTGAGGATTCAGTGAAAGAAAGAGGAGTTTTTTCAATTGCCTTATCTGGTGGTTCTCTGATTAGCTTAATGGGGAAACTCTGCCAAGTTCCATACAAAACAACCGTAGATTGGTCGAAATGGTACGTATTTTGGGCCGATGAACGCGTCGTTTCGAAAAGCCACTCCGACAGCAATTATAAGCTCGCAAAAGATGTCTTTTTGTCCAAGGTGCCTATTGTTCCAAGTCATGTGCACTCTATCAACGATTCAGTGTCAGCTGAGGAAGCAGCCGATGAATACGAGTTTATGATCCGTCAGTTAGTCAAATCACGCACGGTCAACGTATCCGACGTGAGAGATTGTCCCAAATTCGACCTTATACTTCTCGGAATGGGATCAGACGGTCATATCGCCTCGTTATTTCCTAGCCACTCGATCCTTGGCCTCAAAGAAGAGTGGGTTACTTTTATTACTGATTCTCCCAAGCCACCGCCCGAGAGAATTACGCTCACTTTGCCAGTAATAAACTCTGCTTCCAATGTAGCTATAGTCGTGACCGGAAAATGCAAAGCCGAGACGGTGCATTTCGCAGTTGATGATGTGGAACCGTATTGCTCGTCACACCTTCCTGCTAGGATGGTGCAGCCGAGGACGGGAAAGCTTGTGTGGTTTTTGGATAACCAAGCGGCGTCAAAACTCGATAGTTATCAGTTTTCCGACTAG | 801 | 45.69 | MAYSGDCKNREVRIHESLDELSTDLADHIAELSEDSVKERGVFSIALSGGSLISLMGKLCQVPYKTTVDWSKWYVFWADERVVSKSHSDSNYKLAKDVFLSKVPIVPSHVHSINDSVSAEEAADEYEFMIRQLVKSRTVNVSDVRDCPKFDLILLGMGSDGHIASLFPSHSILGLKEEWVTFITDSPKPPPERITLTLPVINSASNVAIVVTGKCKAETVHFAVDDVEPYCSSHLPARMVQPRTGKLVWFLDNQAASKLDSYQFSD | 266 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 15 | 1405910 | 1407300 | - | Bma013107.1 | Bma15g00129 | 96251 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bma15g00129 | 266 | TIGRFAM | pgl: 6-phosphogluconolactonase | 14 | 259 | IPR005900 | GO:0005975|GO:0006098|GO:0017057 | |
| Bma15g00129 | 266 | SUPERFAMILY | NagB/RpiA/CoA transferase-like | 11 | 260 | IPR037171 | - | |
| Bma15g00129 | 266 | Gene3D | - | 7 | 261 | - | - | |
| Bma15g00129 | 266 | CDD | 6PGL | 19 | 251 | IPR005900 | GO:0005975|GO:0006098|GO:0017057 | |
| Bma15g00129 | 266 | PANTHER | 6-PHOSPHOGLUCONOLACTONASE-RELATED | 1 | 266 | - | - | |
| Bma15g00129 | 266 | Pfam | Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase | 18 | 249 | IPR006148 | GO:0005975 | |
| Bma15g00129 | 266 | PANTHER | 6-PHOSPHOGLUCONOLACTONASE | 1 | 266 | IPR039104 | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Bma14g01667 | Bma15g00129 | BCT |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bma10g01315 | Bma-Chr10:46751192 | Bma15g00129 | Bma-Chr15:1405910 | 2.05E-93 | transposed | |
| Bma14g01667 | Bma-Chr14:35349435 | Bma15g00129 | Bma-Chr15:1405910 | 3.13E-91 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bma15g00129 | K01057 | - | csv:101210739 | 429.098 |