Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma15g00131 TATCGTACTGTTGTTGGCAACTTGGTTTATCTTACTGTGACTCGTCCAGATATTGCGAATGTTGTTCATATGGTTAGTCAGTTTGTTACTGCTCCTACTACTGTTCATTGGGCTGCTGTTCTTTGTATTCTAAGGTACCTTCGAGACACTCAATTTCAAAGTCTTTTGTTCCCTTCTATGCCATCTCTCGAGCTGCTTGCATACTCCGATGCTGATTGGGCTGGTGATCATACTGGTCGCAAGTCCATCACTAGATTCTGTATTTTCCTTGGTGATTCACTTATTTCGTGGAAGAGTAAGGGGAAAAGAAGGGAATTTCATGGGCAGTGGAAGGAGAACTTAGTGGGATTGACAGTGGAATCACGAAATAGGGTGGTGGCGGCGGCAGCAAAACAAGCTCTTTTTGGTGGGATAGACATAGGGAAGAAAGGCAGAAGTAGTTTCATGGTTGGACTTGGACATGGACATGGACATGGTCATGGTGGACGACTGATCTCGCAAGGATCGACGGAATCCCAGGGTGGAAGCTTGTCGGAGATGTCGGAATTGGAGAATAAACCTCCAACAGGTATCACATTTTTCAGATTTAATTGTTTGAATCAAGAAGCTCCTCAAGCAGCTCTGACACTGCAAGAACAAGGAAGTGGTGAGGCCGGGGGGTCGAACAAGCTTGAAAATTCAAGCAAATTGATGAAAAACATGTCACTCAAGCAGGATTCGGTAAATAGTAGAGGGAGAGAACGCGGGGCGAATTCAATGGAAGACATGCCGTGCGTATTCACCATAGGAGATGGTCCGAACGGGAGAAGAGTGGAAGGAATTCTGTACAAATATGGAAAGGTGGAGGAGGTGAGAATAATGTGTGTTTGCCATGGTACTTTTCTTTCACCAGCAGAGTTTGTTAAACATGCTGGCGGGGGAGATGTGGCTAACCCACTTAGACACATAGTTGTTCACCCTAAATCCTCTTCATTTTTGTAA 981 44.95 YRTVVGNLVYLTVTRPDIANVVHMVSQFVTAPTTVHWAAVLCILRYLRDTQFQSLLFPSMPSLELLAYSDADWAGDHTGRKSITRFCIFLGDSLISWKSKGKRREFHGQWKENLVGLTVESRNRVVAAAAKQALFGGIDIGKKGRSSFMVGLGHGHGHGHGGRLISQGSTESQGGSLSEMSELENKPPTGITFFRFNCLNQEAPQAALTLQEQGSGEAGGSNKLENSSKLMKNMSLKQDSVNSRGRERGANSMEDMPCVFTIGDGPNGRRVEGILYKYGKVEEVRIMCVCHGTFLSPAEFVKHAGGGDVANPLRHIVVHPKSSSFL 326
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 1429254 1435022 + Bma013110.1 Bma15g00131 96253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma15g00131 326 Pfam Tify domain binding domain 279 318 IPR032308 -
Bma15g00131 326 PANTHER NINJA-FAMILY PROTEIN AFP1 160 323 - -
Bma15g00131 326 PANTHER AFP HOMOLOG 2 160 323 IPR031307 GO:0007165
Bma15g00131 326 MobiDBLite consensus disorder prediction 232 252 - -
Bma15g00131 326 MobiDBLite consensus disorder prediction 159 182 - -
Bma15g00131 326 MobiDBLite consensus disorder prediction 165 182 - -
Bma15g00131 326 CDD RNase_HI_RT_Ty1 67 135 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma14g01666 Bma15g00131 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma14g01465 Bma-Chr14:28686141 Bma15g00131 Bma-Chr15:1429254 2.69E-32 dispersed
Bma15g00131 Bma-Chr15:1429254 Bma14g00314 Bma-Chr14:3887853 4.91E-19 dispersed
Bma04g01682 Bma-Chr4:52929883 Bma15g00131 Bma-Chr15:1429254 7.87E-08 transposed
Bma07g00622 Bma-Chr7:9466038 Bma15g00131 Bma-Chr15:1429254 4.45E-17 transposed
Bma10g00433 Bma-Chr10:4610274 Bma15g00131 Bma-Chr15:1429254 1.81E-24 transposed
Bma14g01078 Bma-Chr14:13094494 Bma15g00131 Bma-Chr15:1429254 1.45E-09 transposed
Bma14g01666 Bma-Chr14:35326287 Bma15g00131 Bma-Chr15:1429254 4.40E-67 wgd
Bma15g00131 Bma-Chr15:1429254 Bma03g00853 Bma-Chr3:8203391 4.89E-25 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma15g00131 - - zju:107429065 197.978