Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma15g00135 ATGGGTCAGCGATTATGGTTGGCTGCGTTTAATCTGATTCTTCTCGTTTCCTCTCTGCTTAGTGGAGTTGTTGTTTGCAAAACTCTCAAGCGAGACGTGAAAGCATTGAATGAAATCAAAGCTTCCGTCGGTTGGAGAGTGGCGTATTCGTGGGTCGGAGACGATCCTTGTGGCGATGGTGGCCTACCTGCTTGGTCGGGTGTCACCTGCTCCACTCAAGGGGATTACAGAGTTGTCACTGCATTAGAAGTTTATGCATCAATTGTGGGTCCTTTTCCTGCTGCTGTAACCAATCTCCTAGATCTTACAAGACTGGATCTTCATAACAATAAGTTGACGGGACCAATTCCCTCTCAAATTGGGCGGTTGAAGCATCTCAAGATACTTAATTTGAGGTGGAATAAATTGCAAGATCCTGTTCCTCCCGAAATTAGTGAACTGAAGAGTTTAACTCATTTATATCTAAGCTTCAATAGTTTCAAAGGTGATATTCCCAAGGAGCTTGCCAATCTTCCAGATCTTCGTTATCTCTGCCTACAAGAAAATCGATTCAGTGGACGAATTCCTGCAGAATTAGGCACCCTGCAAAACCTGCGACACTTGGATGTTGGCAACAATCACTTAGTGGGAACAATAAGAGAACTCATTCGAATTGATGGGTGTTATCCATCTCTCCGGAACTTGTATCTGAATAATAATTATCTCACGGGAGGAGTTCCGGCACAGCTAGCCAACTTGACCAACTTGGAAATCTTGTATCTATCTCACAATAAGATGTCTGGAGTGATTCCATCTGCACTAGCACATATTCAGAGATTGACTTACTTGTACTTGGACCACAACCAGTTTAGTGGGAGAATTCCTCATGCGTTCTACAAACTTCCATTTTTGAAAGAAATGTACATCGAAGGCAACATTTTTAAAGCCGGCGTCAACCCGATCGGAATCCATAAAGTTCTCGAGCTTTCCGATACTGACTTTCTGGTTTAG 990 43.23 MGQRLWLAAFNLILLVSSLLSGVVVCKTLKRDVKALNEIKASVGWRVAYSWVGDDPCGDGGLPAWSGVTCSTQGDYRVVTALEVYASIVGPFPAAVTNLLDLTRLDLHNNKLTGPIPSQIGRLKHLKILNLRWNKLQDPVPPEISELKSLTHLYLSFNSFKGDIPKELANLPDLRYLCLQENRFSGRIPAELGTLQNLRHLDVGNNHLVGTIRELIRIDGCYPSLRNLYLNNNYLTGGVPAQLANLTNLEILYLSHNKMSGVIPSALAHIQRLTYLYLDHNQFSGRIPHAFYKLPFLKEMYIEGNIFKAGVNPIGIHKVLELSDTDFLV 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 1459555 1462155 + Bma013114.1 Bma15g00135 96257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma15g00135 329 Pfam Leucine rich repeat N-terminal domain 30 71 IPR013210 -
Bma15g00135 329 Pfam Leucine Rich Repeat 197 209 IPR001611 GO:0005515
Bma15g00135 329 PANTHER DI-GLUCOSE BINDING PROTEIN WITH LEUCINE-RICH REPEAT DOMAIN-CONTAINING PROTEIN 8 328 - -
Bma15g00135 329 Pfam Leucine rich repeat 223 283 IPR001611 GO:0005515
Bma15g00135 329 Pfam Leucine rich repeat 102 159 IPR001611 GO:0005515
Bma15g00135 329 Gene3D Ribonuclease Inhibitor 29 318 IPR032675 -
Bma15g00135 329 SMART LRR_typ_2 147 171 IPR003591 -
Bma15g00135 329 SMART LRR_typ_2 270 293 IPR003591 -
Bma15g00135 329 SMART LRR_typ_2 195 219 IPR003591 -
Bma15g00135 329 SMART LRR_typ_2 246 269 IPR003591 -
Bma15g00135 329 SMART LRR_typ_2 99 123 IPR003591 -
Bma15g00135 329 PANTHER LEUCINE-RICH REPEAT DOMAIN, L DOMAIN-LIKE PROTEIN-RELATED 8 328 - -
Bma15g00135 329 PRINTS Leucine-rich repeat signature 102 115 - -
Bma15g00135 329 PRINTS Leucine-rich repeat signature 246 259 - -
Bma15g00135 329 SUPERFAMILY L domain-like 61 308 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma15g00135 Bma-Chr15:1459555 Bma01g02655 Bma-Chr1:84043069 1.76E-22 dispersed
Bma15g00135 Bma-Chr15:1459555 Bma04g01039 Bma-Chr4:18724369 2.95E-12 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma15g00135 - - cpap:110823949 548.51