Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma15g00145 ATGAGTTACGGAGAGTCAAGAACCGGCGGGGATTTTGTGGATGAGAAAACCTCCGGCTGCGGAGGAAGCTCGGCGGAAATGACGGAGAAGGAGAGGCAGAAGGAGAAGGCTAGAGTGAGTCGGACGTCGCAGATACTGTGGCATTCTCATCAGAATGATATTGGCTGCGTTCGCAAGCTCCTGGAAGAGGATCGGTCTCTGGTGCAGGCTAAAGACTACGATAATCGAACGCCTCTCCATGTGGCGGCGCTTCATGGTTGGATTGGCGTTGCGAAGTGCTTGATTAAATATGGGGCCGATGTTAATGCTCAGGATCGCTGGAAGAACACTCCTTTAGCTGATGCAGAAGGAACTAAAAGATCTAGCATGATTGAACTGCTGAAATCATATGGGGGCTTGTCGTACGGTCAAAATGGAAGCCACTTTGAACCAAAGCCTGTTCCACCTCCTATGCCAAACAAGTGGGACTGGGAGATCGATCCTTCCGAGTTAGATTTTTCAAAGTCAATTCTTATCGGGAAGGGATCCTTTGGTGAGATATTGAAGGCCCGTTGGCGTGGAACACCTGTAGCTGTCAAACGGATCCTCCCATCACTTTCAGATGATAGATTGGTGATTCAGGACTTCAGGCATGAGGTTAATTTGCTGATGAAGCTTCGACACCCTAATATAGTCCAATTTCTTGGAGCTGTCACTGAGAAGAAGCCCCTTATGTTAGTGACTGAATATTTACGAGGGGGCGATCTTCATCAGTATCTAAAGGAGAAAAGATCACTTAGTACTTCAACAGCTATCAATTTTGCAATGGATATTGCCAGGGGCATGACTTATCTTCACAATGAGCCATACGTTATCATTCATAGAGACCTTAAACCAAGGAATGTTCTTTTAGTCAATTCAACTGCAGACCATTTAAAAGTTGGAGACTTTGGTCTTAGTAAGCTCATTAAGGTTCAGAATTCTCGTGATGTGTACAAAATGACAGGAGAGACAGGAAGTTACCGATATATGGCTCCTGAAGTTTTCAAACATAGAAAATATGACAAGAAAGTTGACGTTTTCTCTTTTGCAATGATACTGTATGAGATGCTTGAAGGAGACCCACCACTCGTCCACTACGAGCCATATGAAGCTGCAAAATATGTGGCAGATGGACATAGGCCTTTATTTCGTGCAAAAGGATACATTCCTGAACTACGAGAATTGACGGAGGAATGTTGGGACGCTGACATGAACAAAAGACCTTCTTTCTTGGAAATTCTCAAGAGACTTGAGAAGATTAAGGAACATGTGCCAGCCGAACATCAATGGAGCATATTCAACTCTTAA 1329 44.39 MSYGESRTGGDFVDEKTSGCGGSSAEMTEKERQKEKARVSRTSQILWHSHQNDIGCVRKLLEEDRSLVQAKDYDNRTPLHVAALHGWIGVAKCLIKYGADVNAQDRWKNTPLADAEGTKRSSMIELLKSYGGLSYGQNGSHFEPKPVPPPMPNKWDWEIDPSELDFSKSILIGKGSFGEILKARWRGTPVAVKRILPSLSDDRLVIQDFRHEVNLLMKLRHPNIVQFLGAVTEKKPLMLVTEYLRGGDLHQYLKEKRSLSTSTAINFAMDIARGMTYLHNEPYVIIHRDLKPRNVLLVNSTADHLKVGDFGLSKLIKVQNSRDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGDPPLVHYEPYEAAKYVADGHRPLFRAKGYIPELRELTEECWDADMNKRPSFLEILKRLEKIKEHVPAEHQWSIFNS 442
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 1509297 1513086 + Bma013124.1 Bma15g00145 96267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma15g00145 442 ProSiteProfiles Ankyrin repeat region circular profile. 74 106 - -
Bma15g00145 442 Gene3D Transferase(Phosphotransferase) domain 1 246 439 - -
Bma15g00145 442 SMART ANK_2a 74 103 IPR002110 GO:0005515
Bma15g00145 442 ProSiteProfiles Protein kinase domain profile. 166 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma15g00145 442 MobiDBLite consensus disorder prediction 1 35 - -
Bma15g00145 442 CDD STKc_MAP3K-like 172 424 - -
Bma15g00145 442 PANTHER SERINE/THREONINE-PROTEIN KINASE STY8-LIKE 25 434 - -
Bma15g00145 442 Gene3D - 15 139 IPR036770 -
Bma15g00145 442 PRINTS Tyrosine kinase catalytic domain signature 279 297 IPR001245 GO:0004672|GO:0006468
Bma15g00145 442 PRINTS Tyrosine kinase catalytic domain signature 395 417 IPR001245 GO:0004672|GO:0006468
Bma15g00145 442 PRINTS Tyrosine kinase catalytic domain signature 241 254 IPR001245 GO:0004672|GO:0006468
Bma15g00145 442 ProSitePatterns Serine/Threonine protein kinases active-site signature. 285 297 IPR008271 GO:0004672|GO:0006468
Bma15g00145 442 Pfam Ankyrin repeats (3 copies) 50 105 IPR002110 GO:0005515
Bma15g00145 442 Gene3D Phosphorylase Kinase; domain 1 150 245 - -
Bma15g00145 442 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 25 434 - -
Bma15g00145 442 SUPERFAMILY Protein kinase-like (PK-like) 149 435 IPR011009 -
Bma15g00145 442 ProSitePatterns Protein kinases ATP-binding region signature. 172 193 IPR017441 GO:0005524
Bma15g00145 442 SMART serkin_6 166 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma15g00145 442 SUPERFAMILY Ankyrin repeat 43 132 IPR036770 -
Bma15g00145 442 Pfam Protein tyrosine and serine/threonine kinase 171 424 IPR001245 GO:0004672|GO:0006468
Bma15g00145 442 PIRSF ILK 3 442 - -
Bma15g00145 442 ProSiteProfiles Ankyrin repeat profile. 74 106 IPR002110 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma14g01847 Bma-Chr14:39510068 Bma15g00145 Bma-Chr15:1509297 1.89E-101 dispersed
Bma15g00145 Bma-Chr15:1509297 Bma02g00273 Bma-Chr2:3146587 1.53E-57 dispersed
Bma15g00145 Bma-Chr15:1509297 Bma03g00620 Bma-Chr3:5114687 1.02E-58 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66934 PF07714 PK_Tyr_Ser-Thr 5.60E-65 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma15g00145 - - csv:101215575 751.125