Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma15g00149 ATGAAAAGCTTAATCCTTTTTTATCTTCTGGTTGCAGGAAAATGGCAGTCACCTGTGTTTTTGGTGGTGGGTTTTCTTGCTGCACTAGTCTCTTCTGCAAAAGGGTATAATGGAGGAGGATGGAGCAATGCTCATGCAACCTTTTACGGCGGCGGTGATGCTTCTGGTACCATGGGAGGAGCTTGTGGGTATGGAAATCTGTACAGCCAAGGGTATGGGACGAACACAGCAGCTCTGAGCACAGCCCTGTTCAATAGCGGTCTGAGCTGTGGGTCTTGCTACGAGATTAAGTGCGTAAATGACAAGTGGTGCCTGCCAGGCTCAATAGTGGTCACTGCTACCAACTTTTGCCCACCAAACAGCGCCCTCCCTAACGATGCCGGCGGCTGGTGTAATCCTCCCCGGCAACATTTTGATCTCTCTCAGCCTGTTTTTCAGCACATTGCTCAGTACAAAGCTGGAATTGTGCCTGTCTCCTATAGAAGAGTGGCCTGCAGCAAAAAGGGAGGAATAAGGTTCACAATCAACGGCCATTCCTACTTCAACCTAGTCCTCATCACCAACGTCGGCGGAGCCGGTGACGTCCATGCACTCTCCGTCAAAGGCTCAAAAACCGGCTGGCAACCCATGTCGAGAAACTGGGGCCAAAACTGGCAGAGCAACTCTTACCTAAACGGCCAGAGCCTGTCTTTCAAGATCACCACTAGCGACGGCCAAACTATCATCTCAAACAATGTCACTCCGGCCGGCTGGTCCTTTGGCCAGACGTTCAGCGGTAGCCAATTCCGCTAG 792 51.39 MKSLILFYLLVAGKWQSPVFLVVGFLAALVSSAKGYNGGGWSNAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNSGLSCGSCYEIKCVNDKWCLPGSIVVTATNFCPPNSALPNDAGGWCNPPRQHFDLSQPVFQHIAQYKAGIVPVSYRRVACSKKGGIRFTINGHSYFNLVLITNVGGAGDVHALSVKGSKTGWQPMSRNWGQNWQSNSYLNGQSLSFKITTSDGQTIISNNVTPAGWSFGQTFSGSQFR 263
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 1543263 1544248 + Bma013128.1 Bma15g00149 96271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma15g00149 263 PANTHER EXPANSIN-A15 22 262 IPR002963 GO:0009664
Bma15g00149 263 Gene3D - 27 166 IPR036908 -
Bma15g00149 263 Pfam Expansin C-terminal domain 171 248 IPR007117 -
Bma15g00149 263 Pfam Lytic transglycolase 76 160 IPR009009 -
Bma15g00149 263 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 59 170 IPR007112 -
Bma15g00149 263 SMART dpbb_1 76 160 IPR007112 -
Bma15g00149 263 SUPERFAMILY Barwin-like endoglucanases 25 188 IPR036908 -
Bma15g00149 263 SUPERFAMILY PHL pollen allergen 167 258 IPR036749 -
Bma15g00149 263 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 180 259 IPR007117 -
Bma15g00149 263 PRINTS Expansin signature 145 158 IPR002963 GO:0009664
Bma15g00149 263 PRINTS Expansin signature 245 261 IPR002963 GO:0009664
Bma15g00149 263 PRINTS Expansin signature 128 145 IPR002963 GO:0009664
Bma15g00149 263 PRINTS Expansin signature 97 108 IPR002963 GO:0009664
Bma15g00149 263 PRINTS Expansin signature 109 119 IPR002963 GO:0009664
Bma15g00149 263 PRINTS Expansin signature 216 237 IPR002963 GO:0009664
Bma15g00149 263 PRINTS Expansin signature 169 181 IPR002963 GO:0009664
Bma15g00149 263 PRINTS Expansin signature 71 85 IPR002963 GO:0009664
Bma15g00149 263 PRINTS Expansin signature 181 202 IPR002963 GO:0009664
Bma15g00149 263 PANTHER EXPANSIN 22 262 - -
Bma15g00149 263 Gene3D - 168 262 IPR036749 -
Bma15g00149 263 PRINTS Expansin/Lol pI family signature 153 169 IPR007118 GO:0005576
Bma15g00149 263 PRINTS Expansin/Lol pI family signature 245 259 IPR007118 GO:0005576
Bma15g00149 263 PRINTS Expansin/Lol pI family signature 58 76 IPR007118 GO:0005576
Bma15g00149 263 PRINTS Expansin/Lol pI family signature 40 55 IPR007118 GO:0005576
Bma15g00149 263 PRINTS Expansin/Lol pI family signature 80 98 IPR007118 GO:0005576
Bma15g00149 263 PRINTS Expansin/Lol pI family signature 207 221 IPR007118 GO:0005576
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma06g00699 Bma15g00149 CCT
Bma06g00699 Bma15g00149 ECH
Bma14g01653 Bma15g00149 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00191 Bma-Chr3:1466600 Bma15g00149 Bma-Chr15:1543263 2.69E-108 dispersed
Bma03g00200 Bma-Chr3:1535352 Bma15g00149 Bma-Chr15:1543263 2.20E-137 dispersed
Bma06g00699 Bma-Chr6:37211612 Bma15g00149 Bma-Chr15:1543263 7.28E-154 dispersed
Bma07g00098 Bma-Chr7:1745475 Bma15g00149 Bma-Chr15:1543263 9.96E-124 dispersed
Bma08g01001 Bma-Chr8:49073113 Bma15g00149 Bma-Chr15:1543263 4.06E-126 dispersed
Bma08g01058 Bma-Chr8:49674715 Bma15g00149 Bma-Chr15:1543263 1.05E-139 dispersed
Bma13g00150 Bma-Chr13:1581215 Bma15g00149 Bma-Chr15:1543263 5.06E-140 dispersed
Bma14g01458 Bma-Chr14:28081838 Bma15g00149 Bma-Chr15:1543263 5.48E-139 dispersed
Bma13g01139 Bma-Chr13:44599622 Bma15g00149 Bma-Chr15:1543263 2.98E-21 transposed
Bma14g01653 Bma-Chr14:35040012 Bma15g00149 Bma-Chr15:1543263 5.90E-145 wgd
Bma15g00149 Bma-Chr15:1543263 Bma06g00694 Bma-Chr6:36989179 1.28E-154 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma15g00149 - - pvy:116140262 450.669