Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma15g00175 ATGGAGGTTGAAAGCAAAGTTGCTGGGGGAGAAGCTCCTGAACCGAAATTCGCTCTACCGGTGGATTCTGAACATAAGTCCACCGTTTTCCGGTTGTTTTCAGTGGCCGCCCCGCACATGCGGGCTTTTCACTTGTCGTGGGTATCCTTCTTTGCTTGCTTCGTCTCCAGTTTCGCCGCAGCGCCGCTAATACCGGTTATTCGAGATAATCTAAATCTCACTGATACCGACATCGGAAACGCCGGTATTGCATCAGTTTCCGGCGCGGTCTTCGCTCGAATTATGATGGGGTCGGCCTGTGACCTCGTCGGACCTCGCCTCGCCTCTGCCTCACTCATCCTCATCACCGCGCCGGCGGTGTACTGCACCTCCCTAGCCAACTCTGCCACGTCATTCCTTCTCGTCCGCTTCTTCACCGGTTTCTCCCTCGCTACCTTCGTTTCCACTCAGTTCTGGATGAGCTCCATGTTCTCGGCTCCAGTAGTTGGCACCGCCAATGGAATCGCAGGCGGATGGGGAAACCTAGGCGGTGGCGCAACGCAGCTCATTATGCCGTACGTATTCGCCATAATTGAGCGTATCGGGTCTACAAAATTCACTGCGTGGCGTATCGCATTCTTCATCCCTGCTCTTTTCCAAACACTATCGGCGTTCGCCGTCCTTCTCTTCGGGCAAGACTTGCCGGACGGAGACTTCCACCGTCTCCAAAAATCCGGCACCAAAGCAAAAGACAACTTCTCCAAAGTCTTCCACCATGGCGTCAGCAATTACAGAGGCTGGATCCTCGCCCTAACTTACGGATACTGCTTCGGCGTAGAACTCACAATCGACAACGTAATCGCCAACTACTTTTACGACAGATTCAATCTGAATCTCCACACCGCTGGAATCGTGGCAGCGAGCTTCGGGTTGGCGAACTTGTTTTCTCGTCCATACGGCGGAATTCTGTCCGACCAGGTGGCCAAGAGGTACGGCATGAGGGGGAGGATATGGACGCTGTGGATAGTACAGACGTTGGGAGGAATATTCTGCGTGGTTTTGGGTCGGGTCGGGTCATTGAGTGTCTCCATTACTGTTATGCTAATCTTCTCTGTGTTCGTACAAGCTGCCTGCGGACTCACTTTCGGCATCGTCCCTTTCGTCTCTCGCAGGTCGCTGGGAGTAATATCAGGGATGACCGGAGGAGGAGGAAACGTCGGTTCAGTTATCACACAGCTAATATTCTTCAGAGGGTCGAGATTTTCAAAAGAAGAAGGAATAACGTATATGGGCGTGATGATAATCGCCTGCACAATCCCACTCTTCTTCATCTACTTCCCTCAGTGGGGAGGAATGCTGTGTGGGCCGACGAGCAAGGTCGCTTCAGAAGAAGACTACTACTTGTCTGAATGGAACGAAGAGGAGAAGAAGAAGGGCTACCATCTTGCCAGCGTCAAGTTTGCAGAAAACAGTCGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGATTCTGATTTTTCCGACCAAACCTACTGA 1989 51.68 MEVESKVAGGEAPEPKFALPVDSEHKSTVFRLFSVAAPHMRAFHLSWVSFFACFVSSFAAAPLIPVIRDNLNLTDTDIGNAGIASVSGAVFARIMMGSACDLVGPRLASASLILITAPAVYCTSLANSATSFLLVRFFTGFSLATFVSTQFWMSSMFSAPVVGTANGIAGGWGNLGGGATQLIMPYVFAIIERIGSTKFTAWRIAFFIPALFQTLSAFAVLLFGQDLPDGDFHRLQKSGTKAKDNFSKVFHHGVSNYRGWILALTYGYCFGVELTIDNVIANYFYDRFNLNLHTAGIVAASFGLANLFSRPYGGILSDQVAKRYGMRGRIWTLWIVQTLGGIFCVVLGRVGSLSVSITVMLIFSVFVQAACGLTFGIVPFVSRRSLGVISGMTGGGGNVGSVITQLIFFRGSRFSKEEGITYMGVMIIACTIPLFFIYFPQWGGMLCGPTSKVASEEDYYLSEWNEEEKKKGYHLASVKFAENSRREREREREREREREREREREREREREREREREREREREREREREREREREREREREREREREREREREREREREREREREREREREREREREREREREREREREREREREREREREREREREREREREREREREREREREREREREREREREREREREREREREREREDSDFSDQTY 662
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 1857833 1859916 + Bma013156.1 Bma15g00175 96297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma15g00175 662 CDD MFS_NRT2_like 43 436 IPR044772 GO:0015112
Bma15g00175 662 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 1 492 IPR044772 GO:0015112
Bma15g00175 662 SUPERFAMILY MFS general substrate transporter 37 441 IPR036259 -
Bma15g00175 662 MobiDBLite consensus disorder prediction 578 662 - -
Bma15g00175 662 Pfam Major Facilitator Superfamily 47 403 IPR011701 GO:0022857|GO:0055085
Bma15g00175 662 ProSiteProfiles Major facilitator superfamily (MFS) profile. 42 442 IPR020846 GO:0022857
Bma15g00175 662 PANTHER HIGH AFFINITY NITRATE TRANSPORTER-RELATED 1 492 - -
Bma15g00175 662 Coils Coil 478 654 - -
Bma15g00175 662 Gene3D MFS general substrate transporter like domains 37 231 IPR036259 -
Bma15g00175 662 Gene3D MFS general substrate transporter like domains 241 443 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g01481 Bma-Chr7:50439618 Bma15g00175 Bma-Chr15:1857833 0 dispersed
Bma11g00186 Bma-Chr11:1680654 Bma15g00175 Bma-Chr15:1857833 6.20E-94 dispersed
Bma15g00175 Bma-Chr15:1857833 Bma06g00534 Bma-Chr6:27430523 5.12E-07 dispersed
Bma15g00175 Bma-Chr15:1857833 Bma07g01480 Bma-Chr7:50432010 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma15g00175 K02575 - csv:101212365 785.793