Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma15g00201 ATGGCGAGAAACGGCGTCGTTTCTTGGACGAAACGGTTTGGGAAAACGCAGAGCGGATGCTGTGATTCATTTCCCACGTCTGATTCAAGTGAAGTTCACGTCCTCGCCGTGGATGACAGTCTGATTGATCGGACTGTGATTGAACGCTTGCTCAAAATTTCTTCCTGCAAAGTTACGGCGGTGGACAGCGGGAGGAGAGCTCTGCAATACCTCGGATTAGATGACGAAACAAGCTCCTCCGATGACTACGACGGTCTGAAAGTGGACATGATCATCACCGATTACTGCATGCCGGGAATGACCGGGTTCGAGTTGCTTAAGAAAATTAAGGAATCATCTACGCTAAGAGAAATACCCGTGGTAATCATGTCGTCGGAAAATATATTAGCCCGAATAGACAGCAGATGTTTGGAAGAAGGTGCAGAGGATTACATAGTGAAACCGGTGAAATTATCAGATGTGGAAAGGCTCAGGGATTACATGAAGAGAGACTCCATCGATGAACATAGCAGCAGTGGGGTCCATAAAAGGAAAGTACGAGATTTCACCGACGTCGAATCATCATCAACGTCCATTTCATCATTTTCGCCATCAAGATCTTCTTCCTCGTGTTCATCATCGTCTATTCCTTCTTCTCCTCCCCCTACATCGCTCGATTCGCCGATCGGACGGCTAAAAATGACCACTACCACAACCACGGCCACGACAGATTAA 714 47.2 MARNGVVSWTKRFGKTQSGCCDSFPTSDSSEVHVLAVDDSLIDRTVIERLLKISSCKVTAVDSGRRALQYLGLDDETSSSDDYDGLKVDMIITDYCMPGMTGFELLKKIKESSTLREIPVVIMSSENILARIDSRCLEEGAEDYIVKPVKLSDVERLRDYMKRDSIDEHSSSGVHKRKVRDFTDVESSSTSISSFSPSRSSSSCSSSSIPSSPPPTSLDSPIGRLKMTTTTTTATTD 237
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 2069839 2070912 + Bma013185.1 Bma15g00201 96323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma15g00201 237 SUPERFAMILY CheY-like 31 156 IPR011006 -
Bma15g00201 237 PANTHER TWO-COMPONENT RESPONSE REGULATOR 15 229 IPR045279 GO:0009736
Bma15g00201 237 Gene3D - 32 193 - -
Bma15g00201 237 ProSiteProfiles Response regulatory domain profile. 33 162 IPR001789 GO:0000160
Bma15g00201 237 MobiDBLite consensus disorder prediction 187 213 - -
Bma15g00201 237 SMART REC_2 32 158 IPR001789 GO:0000160
Bma15g00201 237 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR3-RELATED 15 229 - -
Bma15g00201 237 CDD REC_typeA_ARR 34 157 - -
Bma15g00201 237 MobiDBLite consensus disorder prediction 187 237 - -
Bma15g00201 237 MobiDBLite consensus disorder prediction 222 237 - -
Bma15g00201 237 Pfam Response regulator receiver domain 34 154 IPR001789 GO:0000160
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma14g01784 Bma15g00201 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g00194 Bma-Chr6:2365746 Bma15g00201 Bma-Chr15:2069839 3.40E-59 dispersed
Bma15g00201 Bma-Chr15:2069839 Bma03g00101 Bma-Chr3:830343 2.19E-13 dispersed
Bma14g01751 Bma-Chr14:37731854 Bma15g00201 Bma-Chr15:2069839 3.56E-102 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58464 PF00072 Response_reg 2.00E-20 CL0304 Bma TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma15g00201 K14492 - mnt:21410451 254.218