Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma15g00202 TCTGCCATGGCTATGATTAAGCCATGGCGTCCCAGCTTTCTCTATCTAGTCTTAGTTTTCGTCGCTGAATTTTTCCCCCTCTTTCTCTGCCAATCTAATTCCCCTCAAAATATTGAAACTTTCTATCCGACTCAGATTTCTCCACCTCCACCTCCACCTCCACCACCGCCGGTATTGACTTCGCCGGGAGCAGCTCCGTCACCTGGTTGGGGGAGGACCAGGACGATCGCGACGGCAGTAGTGGTTACTGCGGTTGGGACGCTGTTGATTTCTGCGCTGCTTTTCTTTTTGATCCAGAAGCGTTCGCGGAGAAGAAGGAAAGGACAAGTAACTGCTTCTGGTTCTGTTTCAGATTCTAGGGTTTCGGGTGGTCAGAGGCAGCCGGTGATAATGGCGCAGAATGAGTTCACTAGATTGAGCGGAAATCTGAAGGGATTCATTGTGGATGAGAACGGACTGGATGTGATCTACTGGAGAAAACTCGAGAGTAGAAGGTCGAGGAACAGACCAGCTCCATCGCCTCCTTCTCCACCACCACCTCCTCCAATTTCATCAAACAAAAACGCCGCCCCGCCACCGCCACCTCCACCGCCGAAACCTGTAATTTCGAAAGGGGCGCCTCTTCCATCTCAGACTTTATTGGCGGTTTCCGAAAATAAAGGATCTGGTCCGTCTCCTCCTCCTCCGCCGCCTCCTTTGATTTCTGCAAACAAAAATGCCGGACCTCCACCTCCACCGCCACCTCCTTTGACTTCTGCGAACAAAAACGGCGGGCCACCACCTCCACCGCCCAATCCTGTATCTATGAAATCGGCTCCAAAACCGCCACCGCCACCTGCAACAGATGGGAAACCGGTTGAAGAATCGTCAACCTCGAATGCTGATCAGGTTAAACTGAAGCCATTGCATTGGGATAAGGTGATTACTAAAGATGCATCTCATTCGATGGTGTGGGACAGAATCGATGGAGGTTCTTTCAGGTTTGATGGAGATTTAATGGAAGCTCTGTTCGGAACCGTCGCAACGAACAGAAAATCCCCTCGGAAAACAAGGGATCCAGCTGCTCCGACCGGTGGAGACTCCAAAGCACCAGCTAAGATCTTCATCCTCGATTCAAAAAAGTCTCAGAACACCGCGATTGTTATCAAGTCCATGTCAATTTCTCGAGACGAAATCGTCGACGCTCTCATGGACGGCCACGGTCTCGAGTCGGACGTTCTCGAAAAGCTCACAAAAATAGCTCCGAGTCAAGAAGAACAATCTCACATACGGAATTTCGAAGGAGACTCGCTGAACTTAGCCGACGCGGAATCGTTCCTCTTTAAGCTTCTGAAAGCTGTTCCATCCGCTTTTACTCGATTAGATACGATGCTTTTCCGATCAAGTTACGATTCAGAGATTCTTCATCTGAAGGAATATCTAGAATCCATTGAATCAGGTTGCAAAGAGCTTCGAACTCAGGGACTCTTCATGAAACTACTCGAAGCAGTTCTCAAAGCCGGAAATCGGATGAATGCAGGCACTTCAAGAGGTAATGCTCAGGCATTCAACCTGAGCGCTCTCCGGAAACTCTCCGACGTCAAAAGCACGGACGGAAAAACTAGTCTCCTCCACTTCGTCGTCGAAGAAGTAGTCAGATCGGAGGGGAAGAAATGCGTCTTGAACAGAAACAAGAGCTTCAGCCGGAGCAGTAGTAAAAGTAGCAGTAACAGCATAAACTCCGATGATTCGACGTCCAAAGACGAAAGAATGAATGAATACACGACGCTCGGATTACCAATTGTCGGAGGCCTCAGTGCACAGTTCTCAAACGTTAAAAAAGCCGCCGCCATTGATTACAACACCTTCTCCGGAATATGCTCCGGACTCATATCCCGTACTTCCGAAATTCGACAGATTCTTCCTAAATGTGCCGGCGATGGAGGAACGTTCGTTAAAGAAACGGAGAATTTTCTTGAATCATCTGAAAAGGAACTAAAGAAGTTAAGGGAAGAGCAGACGAGAGTTATGGAGCTTTTGAAGACGACGACCGGATATTATCAGGCGGGAGGTTTCAAGGGCCAAGAAGCTCAACCTCTTCAACTATTTGTAATCGTAAAGGAATTCCTGGACATGGTCGATCAGGTCTGCGTCGGTATAGCTCGGAATCTGCAGAGAAAGAAGTCATCAATGGCGAGCACTGGTTCTCCTTCAACAAAATCTCCGCCATTGAAGACCCAAGTAAGGTTCCCCTTCCCCAACTTGGCTGCGCATTTCTTGTCAGACAAATCCCAATCCAGGAGCTCTTCTAGTGATGATTCAGATGATTAA 2310 48.57 SAMAMIKPWRPSFLYLVLVFVAEFFPLFLCQSNSPQNIETFYPTQISPPPPPPPPPPVLTSPGAAPSPGWGRTRTIATAVVVTAVGTLLISALLFFLIQKRSRRRRKGQVTASGSVSDSRVSGGQRQPVIMAQNEFTRLSGNLKGFIVDENGLDVIYWRKLESRRSRNRPAPSPPSPPPPPPISSNKNAAPPPPPPPPKPVISKGAPLPSQTLLAVSENKGSGPSPPPPPPPLISANKNAGPPPPPPPPLTSANKNGGPPPPPPNPVSMKSAPKPPPPPATDGKPVEESSTSNADQVKLKPLHWDKVITKDASHSMVWDRIDGGSFRFDGDLMEALFGTVATNRKSPRKTRDPAAPTGGDSKAPAKIFILDSKKSQNTAIVIKSMSISRDEIVDALMDGHGLESDVLEKLTKIAPSQEEQSHIRNFEGDSLNLADAESFLFKLLKAVPSAFTRLDTMLFRSSYDSEILHLKEYLESIESGCKELRTQGLFMKLLEAVLKAGNRMNAGTSRGNAQAFNLSALRKLSDVKSTDGKTSLLHFVVEEVVRSEGKKCVLNRNKSFSRSSSKSSSNSINSDDSTSKDERMNEYTTLGLPIVGGLSAQFSNVKKAAAIDYNTFSGICSGLISRTSEIRQILPKCAGDGGTFVKETENFLESSEKELKKLREEQTRVMELLKTTTGYYQAGGFKGQEAQPLQLFVIVKEFLDMVDQVCVGIARNLQRKKSSMASTGSPSTKSPPLKTQVRFPFPNLAAHFLSDKSQSRSSSSDDSDD 769
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 2073879 2076565 + Bma013186.1 Bma15g00202 96324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma15g00202 769 MobiDBLite consensus disorder prediction 109 128 - -
Bma15g00202 769 MobiDBLite consensus disorder prediction 721 738 - -
Bma15g00202 769 MobiDBLite consensus disorder prediction 106 128 - -
Bma15g00202 769 MobiDBLite consensus disorder prediction 164 298 - -
Bma15g00202 769 MobiDBLite consensus disorder prediction 222 283 - -
Bma15g00202 769 SUPERFAMILY Formin homology 2 domain (FH2 domain) 259 719 - -
Bma15g00202 769 PANTHER FORMIN-RELATED 222 764 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Bma15g00202 769 Pfam Formin Homology 2 Domain 293 706 IPR015425 -
Bma15g00202 769 CDD TM_EGFR-like 75 107 - -
Bma15g00202 769 PANTHER FORMIN-RELATED 3 168 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Bma15g00202 769 MobiDBLite consensus disorder prediction 40 69 - -
Bma15g00202 769 MobiDBLite consensus disorder prediction 721 740 - -
Bma15g00202 769 ProSiteProfiles Formin homology-2 (FH2) domain profile. 289 732 IPR015425 -
Bma15g00202 769 PANTHER FORMIN-LIKE PROTEIN 4 222 764 - -
Bma15g00202 769 MobiDBLite consensus disorder prediction 44 63 - -
Bma15g00202 769 Gene3D Formin, FH2 domain 309 732 IPR042201 -
Bma15g00202 769 PANTHER FORMIN-LIKE PROTEIN 4 3 168 - -
Bma15g00202 769 Coils Coil 645 672 - -
Bma15g00202 769 MobiDBLite consensus disorder prediction 343 363 - -
Bma15g00202 769 MobiDBLite consensus disorder prediction 560 575 - -
Bma15g00202 769 SUPERFAMILY Formin homology 2 domain (FH2 domain) 48 163 - -
Bma15g00202 769 MobiDBLite consensus disorder prediction 560 582 - -
Bma15g00202 769 SMART it6_source 289 721 IPR015425 -
Bma15g00202 769 MobiDBLite consensus disorder prediction 170 204 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00803 Bma-Chr3:7425789 Bma15g00202 Bma-Chr15:2073879 8.98E-139 dispersed
Bma15g00202 Bma-Chr15:2073879 Bma14g00359 Bma-Chr14:4370430 5.43E-97 dispersed
Bma14g01752 Bma-Chr14:37740998 Bma15g00202 Bma-Chr15:2073879 4.50E-55 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma15g00202 - - jre:108989824 649.047