Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma15g00213 ATGGTGGTTTCTCTCCATTCACCTTCTCACTTTCTCTCTCTACTGATTTTCACATCAGCTTTTGCAATCTCCCATGGAGGTTCAAACCAAAACATGGTTCCGATGACTTGTTCTTCGCTGAAAAAGACATGTAACGCGTCCTTGTATCGCGTCGACAATGGCCTCCCGGAAGATCAGATTGCCTCCTTCTACTCTGTAAATTCATCTCAAATCACCCCAATAATGGCAGCCAACAGACAAGATTATCTCATCACCGTACCCTTCCTATTTGTTGCTAAAATACATGATTTGTTGTTTTTGCCGTCAGATAATAAACACGTATGGACAATAATTGTCGGGGTAGCCTCCGGCGTCGCGATTGTCTCGTTAGCTTCATTGATCTTCATCATCCTTGTCAAGAGAAAAAGATGGCCGCCGGCCAACGAGGACGAGCAGAGAGTCGTATCGAAAAGCTCGAGTGACAAGAGAAACTTTTCGTGGCAAAATCAAATTACAAGTAAGAATAACATCGAGAGTCGTACGAAATCGAGCAGAAGAAATGTTGCGGCTTTCGAATCCGAGAAGGCAGCCATTTTTGCGATCGAGGAGATTGAAGAGGCCACAGACAATTTCAATGAAAACCGAAAAATTGGAGAAGGTGGATATGGAACAGTTTACTTTGGAGTGATAGGGGGCCAGGAAATTGCAGTGAAGAAGATGAGGTCAAGTAAATCAAAAGAGTTCTTTGCAGAACTGAAAGTTCTTTGCAAGATTCATCACATTAACGTGGTTGAGCTGTTGGGATATGCCTATGGAGATGATCATCTCTACTTGGTCTATGAGTTTGTTCAAAATGGATCTCTCAGTGACCATCTTCACGATCCATTACTTAAAGGTTACCAGCCTCTCTCTTGGACAGGAAGAACACAAATTGCACTCGACGCAGCCAAAGGCATCGAGTACATACATGATCATACAAAATCACGATATGTACATCGCGATATAAAGACGACTAACATTCTACTCGACGACGGGCTGAGAGCAAAGGTAGCAGACTTTGGTTTAGCAAAGTTGGTCGGAAGAACGAACGAAGAAGACTTCATCGCAACGAGACTCGTTGGAACTCCGGGATACCTTCCGCCGGAATCTGTGAAGGAGCTTCAGGTGACGCCCAAGACAGACGTGTTTGCTTTTGGAGTAGTTTTAGCTGAGCTTATAACAGGGAAACGTGCACTTATTAGGGACAAAAACCTACCCAATAAGACAATGTCTCTTATTAAAATTATTAACATGATATTTGAAGACGATGATCCGGAGGCGGCTCTCGAAGCCTCCATAGATGAGAATCTCCAAGGCAACTATCCTTCGGAAGAGATATACAAGATGGCGGGGATTGCGGTTTGTTGTTTGAGCGAGGAGGCGGTGAACAGGCCGGAGATGCGAGAGATTGTGGCAGCACTGTCGCAGATAATGGATTCGACCATAGAATGGGAAGCGTCGTTGGGTGGCAGAAGCCAAGTTTTTAGTGGCATCTTTAGTGGAAGATGA 1527 44.47 MVVSLHSPSHFLSLLIFTSAFAISHGGSNQNMVPMTCSSLKKTCNASLYRVDNGLPEDQIASFYSVNSSQITPIMAANRQDYLITVPFLFVAKIHDLLFLPSDNKHVWTIIVGVASGVAIVSLASLIFIILVKRKRWPPANEDEQRVVSKSSSDKRNFSWQNQITSKNNIESRTKSSRRNVAAFESEKAAIFAIEEIEEATDNFNENRKIGEGGYGTVYFGVIGGQEIAVKKMRSSKSKEFFAELKVLCKIHHINVVELLGYAYGDDHLYLVYEFVQNGSLSDHLHDPLLKGYQPLSWTGRTQIALDAAKGIEYIHDHTKSRYVHRDIKTTNILLDDGLRAKVADFGLAKLVGRTNEEDFIATRLVGTPGYLPPESVKELQVTPKTDVFAFGVVLAELITGKRALIRDKNLPNKTMSLIKIINMIFEDDDPEAALEASIDENLQGNYPSEEIYKMAGIAVCCLSEEAVNRPEMREIVAALSQIMDSTIEWEASLGGRSQVFSGIFSGR 508
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 2120393 2123252 - Bma013196.1 Bma15g00213 96335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma15g00213 508 Gene3D Transferase(Phosphotransferase) domain 1 276 494 - -
Bma15g00213 508 ProSitePatterns Protein kinases ATP-binding region signature. 210 232 IPR017441 GO:0005524
Bma15g00213 508 ProSitePatterns Serine/Threonine protein kinases active-site signature. 323 335 IPR008271 GO:0004672|GO:0006468
Bma15g00213 508 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 89 508 IPR044812 GO:0019199|GO:0045087
Bma15g00213 508 SMART serkin_6 204 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma15g00213 508 Pfam Protein kinase domain 204 477 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma15g00213 508 PANTHER LYSM-DOMAIN PROTEIN KINASE FAMILY PROTEIN-RELATED 89 508 - -
Bma15g00213 508 ProSiteProfiles Protein kinase domain profile. 204 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma15g00213 508 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 19 87 IPR044812 GO:0019199|GO:0045087
Bma15g00213 508 PANTHER LYSM-DOMAIN PROTEIN KINASE FAMILY PROTEIN-RELATED 19 87 - -
Bma15g00213 508 Gene3D Phosphorylase Kinase; domain 1 182 275 - -
Bma15g00213 508 SUPERFAMILY Protein kinase-like (PK-like) 186 480 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma13g01247 Bma-Chr13:45772875 Bma15g00213 Bma-Chr15:2120393 4.34E-115 dispersed
Bma15g00213 Bma-Chr15:2120393 Bma02g01014 Bma-Chr2:51290606 6.51E-65 dispersed
Bma15g00213 Bma-Chr15:2120393 Bma10g00543 Bma-Chr10:6598170 1.35E-71 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66936 PF00069 Pkinase 2.20E-47 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma15g00213 - - mcha:111019674 600.127