Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma15g00237 ATGGTGATCATGGCGACTGAGTTTTTGAAGCTAAAGTTCATCTTCCTACTTCATTGTTCGTGTTGGTACCTTGCTCTTTGTCTCACTCCAGATGGGCTCGCCCTTCTCTCTCTGAAATCGGGAGTCGATGGCTCCTCTGACGATTCTGTTTTTTCCGACTGGAATTCCAGCGACTCCACGCCGTGCCGGTGGTCCGGCATTTCCTGCATGAACATCACTGGCTTACCGGTTCCGCGAGTTGTCGGCATTGTCCTCTCCGGAAAAAATCTACGAGGGTATATTCCGTCGGAACTCGGATCACTGAGGTATCTTCGGAGGTTGAACCTCCGTAACAATTACTTCTATGGTTCGATACCGGAGCAGCTCTTCAACGCTACCTCACTGCATAGTCTGTTTCTCTTCGGTAACAATCTCTCTGGTTCTCTTCCTTCCTCATTATGTAATGTACCGAGGCTCCAGAATCTTGATCTTTCCAGTAACTTTCTCGCTGGATCTTTACCAAAAGATTTGAGAAATTGTAAGCAGATGCAGCGCATGGTACTCGCCGGAAACAAATTCAGTGGCGAAATTCCGGCGGGTATTTGGACCGAAATGGTTAACTTGATTCAGCTCGATCTCTCCGCCAATAATTTCAACGGATCTATTCCAGAGGATATGAGCGAACTCAAGTCACTTGCCAGTATCCTCAACCTATCTTACAATCATTTATCCGGTACAATCCCTAAATCTCTCGGAGATTTGCCGATGACCGTCACTTTCGATCTTCGAAACAACAATTTGAGCGGCGAAATACCACAAAGTGGGTCATTTGAAAATCAAGGTCCCACTGCATTTCTCAACAATCCTATGCTATGCGGAAATCCTCTGCCAAAACCTTGCGGGAGTTCAATCCAGAGCTTTCCGCAAAGTCCGGTTTCCTCGCCGGTGCTCGATTTCAGCCATAGAAAAGGCTCGAGTCCTGGATTACTCGTTCTCATATCCATAGCCGATGCAGCAGGAGTGGCTATAATCGGCCTAATAATCGTTTACGTATATTGGAAAAGGAAAGGGAATTCTAATGGGGGAAATGAAAAAACCCACCTCTGTTCGTCTTGCTTGGACGAGGACTCTGACATGGAGGATCAGGTTAAAGCAGAAAGAGGGGAAGGTGAAGGAGAACTCGTGGCCATCGATAAAGGTTTTACGTTCGAGCTGGACGAGCTGTTACGAGCTTCGGCGTACGTCTTGGGGAAGAGTGGTTGGGGAATTGTTTACAAAGTGGTGCTTAAAAATGGCGTTCCTGTTGCAGTGAGGAGGCTGGGTGAAGGAGGAAGAGATAGATACAAGGAGTTTGCTGCAGAAGTGGCCGCCATTGGAAAGGTGAAGCATCCCAACATTTTGAATCTGAGGGCTTTCTATTGGGCTTCCGACGAGAAGCTTTTGATCAGTGATTTCATCTCCAATGGCAGTTTAGCTTCTGCTCTTCGCGGCAAAAATGGCCAGCCTTCAACCTCTCTTCCATGGTCAACAAGGCTGAAAATTGCCAAAGGAACTGCCAGGGGATTAGCCTATCTCCACGAGTGTAGTCCAAGAAAATTCATCCATGGCGATATAAAGCCCTCCAACATTCTTCTCGATAGTGAATTCCGGCCCTACATCTCAGATTTCGGCCTCGATCGTCTGATAAACATCACCGGCAACAGCACCTCCTCCGGCAGCCAAAGCGGTGGAGCTTTCTCCTACTTAAAATCACTCCACATAGAGCAAACAACAAGCTATCTAGCCCCAGAGGCTAGAAATCCAGGCAGCAAAACGACGCAAAAACGGGACGTCTACTCGTTCGGAGTAGTCCTGCTGGAACTGCTCACCGGAAAATCTCCCCAACATCCTCAATCCACGTCGACTTCAATGGAAGTTGGAGATATTGTGAGGTGGGTGAAGAAAGGATTCGAAGAAGAACAGCCATTGTCGGACATAGTCGATCCGCAGCTTCTTCAAGAAGTTCATGCCAAAAAGGAAGTACTTGCTGCATTTCATGTTGCTCTCGCCTGCACTGAGGCTGACCCTGAAATTCGTCCCAGAATGAGAACTGTTTCTGAAAATCTTGATCGAATTGGAAAGTGA 2103 47.46 MVIMATEFLKLKFIFLLHCSCWYLALCLTPDGLALLSLKSGVDGSSDDSVFSDWNSSDSTPCRWSGISCMNITGLPVPRVVGIVLSGKNLRGYIPSELGSLRYLRRLNLRNNYFYGSIPEQLFNATSLHSLFLFGNNLSGSLPSSLCNVPRLQNLDLSSNFLAGSLPKDLRNCKQMQRMVLAGNKFSGEIPAGIWTEMVNLIQLDLSANNFNGSIPEDMSELKSLASILNLSYNHLSGTIPKSLGDLPMTVTFDLRNNNLSGEIPQSGSFENQGPTAFLNNPMLCGNPLPKPCGSSIQSFPQSPVSSPVLDFSHRKGSSPGLLVLISIADAAGVAIIGLIIVYVYWKRKGNSNGGNEKTHLCSSCLDEDSDMEDQVKAERGEGEGELVAIDKGFTFELDELLRASAYVLGKSGWGIVYKVVLKNGVPVAVRRLGEGGRDRYKEFAAEVAAIGKVKHPNILNLRAFYWASDEKLLISDFISNGSLASALRGKNGQPSTSLPWSTRLKIAKGTARGLAYLHECSPRKFIHGDIKPSNILLDSEFRPYISDFGLDRLINITGNSTSSGSQSGGAFSYLKSLHIEQTTSYLAPEARNPGSKTTQKRDVYSFGVVLLELLTGKSPQHPQSTSTSMEVGDIVRWVKKGFEEEQPLSDIVDPQLLQEVHAKKEVLAAFHVALACTEADPEIRPRMRTVSENLDRIGK 700
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 2369232 2371408 - Bma013223.1 Bma15g00237 96359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma15g00237 700 Gene3D Transferase(Phosphotransferase) domain 1 479 700 - -
Bma15g00237 700 ProSiteProfiles Protein kinase domain profile. 403 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma15g00237 700 Gene3D Phosphorylase Kinase; domain 1 392 478 - -
Bma15g00237 700 CDD STKc_IRAK 409 698 - -
Bma15g00237 700 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 13 699 - -
Bma15g00237 700 SUPERFAMILY L domain-like 26 290 - -
Bma15g00237 700 Gene3D Ribonuclease Inhibitor 30 194 IPR032675 -
Bma15g00237 700 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 13 699 - -
Bma15g00237 700 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Bma15g00237 700 Pfam Protein kinase domain 408 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma15g00237 700 ProSitePatterns Serine/Threonine protein kinases active-site signature. 526 538 IPR008271 GO:0004672|GO:0006468
Bma15g00237 700 Gene3D Ribonuclease Inhibitor 196 294 IPR032675 -
Bma15g00237 700 SUPERFAMILY Protein kinase-like (PK-like) 408 694 IPR011009 -
Bma15g00237 700 SMART serkin_6 407 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma14g01908 Bma15g00237 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02720 Bma-Chr1:84541492 Bma15g00237 Bma-Chr15:2369232 8.60E-173 dispersed
Bma15g00237 Bma-Chr15:2369232 Bma08g01035 Bma-Chr8:49494359 8.58E-30 dispersed
Bma15g00237 Bma-Chr15:2369232 Bma14g01908 Bma-Chr14:40794714 8.07E-129 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66937 PF00069 Pkinase 1.20E-32 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma15g00237 - - pop:7460021 958.362