Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma15g00241 ATGATGGGGCATGAGTGTGTATCAATCGATGAAAATGATGATTTTCTCATTGTAACTGCATCGTATTTGAAGGAAGGAAAGTATATGAAGAGGAAAATCCACTGTAATGTTCTTGTCAGTGCAGATGGAGCGGGAAGTACAGTGCGGAAGCTGGTTGGAATAAAAATGGAAGGTCAAAAGGATTTGCAAAAACTTGTTAGCGTCCATTTCTTTAGTAGTAGCCTTGGACAATACCTACTAAATGAGAAGCCTGGTATGCTATATTTTATCTTCAACACGGAAGCCATTGGAGTTCTTGTTGCCCACGATCTTGAGCAAGGAGAATTTGTGTTGCAGATACCATTCTATCCGCCTCAGCAGAAACTTGAAGATTTCACCCCAAAGATGTGTGAAAAATTAATTTTCAACTTGGTCGGTCGAGAGCTTGGAGACGTTTATGTAAAAGATGTCAAACCATGGGTGATGCATGCTGAAGTTGCTGAGAAGTTCACGGCCTGTGATAATCGAGTAATACTTGCTGGTGATGCTGCCCATCGATTTCCTCCGGCTGGTGGCTTTGGAATGAATACTGGTATTCAGGATGCTCATAATCTTGCCTGGAAATTAGCGTCGGTAGTACAGGGTATTGCATCATCTTCGATACTGAGAACTTATGAAGTGGAACGTAGACCGATAGCTCTTTTCAATACATCACTTAGTGTCAAAAACTTCAGAGCAGCCATGGAAGTTCCTGCTGCTCTTGGTCTTGATCCTAAGGTTGCAAACTCAGTGCATCAACTGATTAATAATTCAGTTGGTTCCATTTTACCATACGGGCTTCAAAGTGCAATTCTCGATGGAATTTTCAAAATAGGCCGTGCACAGCTCTCACAATCTTTTCTCGATGAGAAAAACCCCATTGGATCTGCACGACTTTCCAAGTTAAGACGCATATTTGATGAAGGAAAGAGTCTTCAGCTACAGTTTCCTGCTGAGGATATTGGATTTAGATACCGTCGAGGAGCAATTATCCCCGATGAGGCTACTTTACTGGATGTTCCAGAGATACACACTGGTCGTCGGAGGGAATATATACCGTCTGCAGATCCAGGATCAAGGCTACCTCATATGAAAGTGAGGATATCGTCGGTGACGCCTGGAGAGGAAACAATTTCTACACTAGATCTTGTATCTGGAGACAGGGTGGAGTTTCTTCTCATAATAGCACCAAAAGAAGAGTCCTACAATCTAGCACTTGCAACATTCAAGGTGGCAGAGGAATTCAAAGTTTCTGCTAAAACATGCATAATTTGGCCTGCTGGCGTGATCGTAGGTGAATCAAGGAGTAAAGAAGCATTGACGCCATGGGAGAATTACGTCGATGTTGTGGAAATTAAGACGTTACCAACTTCGCCATCGTGGTGGGAAAACTGTCAGATGACCGACATCGGAGCCATTCTAGTCCGGCCGGATGACCACATTGCCTGGCGAGTGAGGTCGGGTCCGTTGATGATCCTATTCTGGAACTGA 1509 43.61 MMGHECVSIDENDDFLIVTASYLKEGKYMKRKIHCNVLVSADGAGSTVRKLVGIKMEGQKDLQKLVSVHFFSSSLGQYLLNEKPGMLYFIFNTEAIGVLVAHDLEQGEFVLQIPFYPPQQKLEDFTPKMCEKLIFNLVGRELGDVYVKDVKPWVMHAEVAEKFTACDNRVILAGDAAHRFPPAGGFGMNTGIQDAHNLAWKLASVVQGIASSSILRTYEVERRPIALFNTSLSVKNFRAAMEVPAALGLDPKVANSVHQLINNSVGSILPYGLQSAILDGIFKIGRAQLSQSFLDEKNPIGSARLSKLRRIFDEGKSLQLQFPAEDIGFRYRRGAIIPDEATLLDVPEIHTGRRREYIPSADPGSRLPHMKVRISSVTPGEETISTLDLVSGDRVEFLLIIAPKEESYNLALATFKVAEEFKVSAKTCIIWPAGVIVGESRSKEALTPWENYVDVVEIKTLPTSPSWWENCQMTDIGAILVRPDDHIAWRVRSGPLMILFWN 502
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 2421345 2424143 + Bma013227.1 Bma15g00241 96363

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bma15g00241 502 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 182 198 - -
Bma15g00241 502 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 200 218 - -
Bma15g00241 502 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 218 234 - -
Bma15g00241 502 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 34 49 - -
Bma15g00241 502 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 167 182 - -
Bma15g00241 502 Gene3D - 159 268 IPR036188 -
Bma15g00241 502 Gene3D - 324 497 - -
Bma15g00241 502 PANTHER FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN 1 493 - -
Bma15g00241 502 Pfam FAD binding domain 4 226 IPR002938 GO:0071949
Bma15g00241 502 SUPERFAMILY FAD/NAD(P)-binding domain 2 248 IPR036188 -
Bma15g00241 502 Gene3D - 27 158 - -
Bma15g00241 502 PANTHER TRK SYSTEM POTASSIUM UPTAKE PROTEIN 1 493 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma15g00241 - - - csin:114311448 743.806
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g1154 . . . . . . . Bma15g00241 . . . . . . . Cpe09g00574 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005022 1 5 1 1 1 2 1 3 2 0 1 1 1 1 1 1 1 1 1 2 1 1 1 2 1 1 1 1 3 1 41
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bma15g00241 Bma_Chr15 FPKM 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0