Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma15g00250 ATGGCTTCTTTCATCACTCTCCTGGTTCTTTTGATTTCCTCTGTTTATTACGTCGCTTGCCAAGTTCAAGATTTCATCAGTATTGACTGTGGAGGCTCGACAAACTATACCGACACAACTACAGGGCTGCAATGGCTGCCAGACAGAGAAATGATGAACGATGGAAGAACCGTGGAAGTAGAGAACCCTAGCGGAAACTTAACGCAGTATCAGAGACGGCGAGATTTTCCGATCGATTCAAAGAAATACTGCTACACCTTAAGCACGAAGGAACGAAGGCGATATTTAGTTAGGGCAACGTTTCAATACGGAAATCTGGAAGAAGAAGACACATTGCCGAAATTCGTGCTTTATTTAGACACAACTAAATGGTCAACAGTAGCAATCGTAGACACTTCAAGAGTATATGTGAAGGAAATGGTTATCAGAGCTCCTTCGACCTCCATTGATGTCTGCTTATGCTGTGCAATAACTGGTTCTCCATTTATATCCACTCTCGAGCTTCGCCCTTTTAATCTTTCAATGTACGCGACAGACTTCGAGGACAGGTTTTATCTCCAAGTAGCTGCTAGATTAAACTTTGGAGCTTTAAGCAAGAACCCCATAAGGTACCCAGATGACCCATATGACAGAATATGGGATTCTGATCTTGACAGAAGGCAGAATTTCCTTGTTGGGGCTGCCTCTGGAACAAAGAGAATCAATACATCTAAGAACATAGACATAAGAACAAGAGAGTTTCCACCAGTTAAAGTAATGCAAACTGCAGTTGTGGGGACAGAGGGGGTCCTCAGTTACAGATTAAACTTAGAAAATTTCCCGGCAAATGCTCGAGCATACGCTTATTTTGCTGAAATTGAGGACGTTAGTCCTAACCAGACTCGAAAGTTTAAACTACAACAACCTTATTTTCAAGATTATAGCAATGCTGTGGTGAATATTGCAGAGAATGCCAATGGAACCTACACTCTTTATGAACCGAGTTACATGAACGTGTCGTTGGATTTTGTTCTTTCTTTCTCTTTTGTTAAAACGAGAGACTCTTCTCTGGGGCCATTGTTGAACGCAATGGAAATAAGCCGATATGTGGAAATTTCGGCCAAGACTGACTCGAAGGATCTGATTGCCAGCCGTTCCCTTCGAGCGATGTTGGGCGATGATGTTTCAACAAATGAAGGGGATCCTTGTGCTCCAACCCCCTGGGAATGGGTGACTTGCAGCTCTACTTTACCTCTCAGAATTGTCAAAATTGGGCTTTCAGGTAAAAGTGCCAAGGGCGAAATCCCATCTGAGATCAACAACATGGATGCCTTGACCGAGTTATGGCTCGATGGAAACTCCCTCACGGGACTGCTTCCTGACATGAGCAAGCTCGTAAATTTAAGGGTTTTGCATTTGGAGAACAACAATATGAAGGGTCCACTATCTTCTTACCTGGGCAATTTACCAGACTTAGAAGAACTGTACATTCAGAACAATTCTTTTTATGGGGAGATACCTCCAGATTTGTTGAGGAAGAAACTCATCTTCAATTATCAGGGTAATCCACAGCTACACAAGGGAACACGAAGCAAGATGAATTTCAAGCTCTTCCTCGGAACACTAGCCGGAGTTCTTGCCGTTTTATCTTTCTTGTTAGTGCTGAGTTTTCTTCTGTTACGAAATTTTCGAAGAAAGAAGTCTCGTCAAAAGAGTATTTGCAAAGGTGATTCTCTTCGAACCAGCACAAAGCCATCTATGGCATATTCGATTTCTCGAGGCGACGAAGGCATAGCGTATTATATTACATTGTCCGAGCTTGAAGAAGCAACTGATAACTATTCAAAGAAAATAGGGAAAGGGAGCTTTGGGTCTGTATATTATGGAAAAATGAAAGATGGAAAAGAGGTGGCTGTCAAGATTATGTCGGATTTATCCATCCATGGGAATAAGCAGTTCATGACTGAGGTAGCTCTCTTGTCGAGGATTCATCACAGGAATTTAGTTCCTTTAATTGGGTACTGCGAGGAAGAAGAGCAATCCATTCTGGTTTATGAATATATGCACAATGGAACACTGCGAGATCATCTAAGCGGTAGTGGAAGCCGTAAGTTCATGGACTGGCTAACTCGGCTTCGCATTGCAGAAGATGCAGCGAAAGGTCTTGAATACTTGCATACTGGTTGTAACCCTGGAATCATACATCGAGACGTAAAAACCAGCAATATTCTAGTAGACATCAATATGAGAGCCAAAGTTTCTGATTTTGGACTTTCGAGGCAGGCCGAGGATGATCTGACTCATGTTTCTAGTGTGGCGAGAGGAACTGTCGGCTATCTGGATCCCGAGTACTATGCTTGTCAGCAATTGACTGAGAAAAGCGATGTCTACAGTTTCGGAGTTGTTCTGCTAGAGCTGATTTCTGGAAAAAAACCTGTCTCCGCCGATGATTACGGCAGTGATATGAACATCGTTCACTGGGCGAGATCTTTAGTCAGGAAAGGGGACGTGATAAGCATTGTCGATCCATTTTTAGTCGGGAACGCGAAAATCGAATCGATATGGAGGATTGCAGAGGTTGCGATTCAATGCGTCGAACAAAATGGAGTTTCCCGGCCAAGGATGCAGGAGATAATCTTGGCAATTCAAGATGCTACCAAGATAGAGAGGGGGAACGAAGCCGGCGGCAGCAGCAACTTATCTTCTGGAAGTTCAAACAAAGCTCAGTCGTCGAGGAAAACTCTGCTGACAACCTTTCTCGAGATCGAGAGCCCCGACTTATCGAACGACGGCTTTCTTCCCCGGGCAAGGTAG 2793 43.61 MASFITLLVLLISSVYYVACQVQDFISIDCGGSTNYTDTTTGLQWLPDREMMNDGRTVEVENPSGNLTQYQRRRDFPIDSKKYCYTLSTKERRRYLVRATFQYGNLEEEDTLPKFVLYLDTTKWSTVAIVDTSRVYVKEMVIRAPSTSIDVCLCCAITGSPFISTLELRPFNLSMYATDFEDRFYLQVAARLNFGALSKNPIRYPDDPYDRIWDSDLDRRQNFLVGAASGTKRINTSKNIDIRTREFPPVKVMQTAVVGTEGVLSYRLNLENFPANARAYAYFAEIEDVSPNQTRKFKLQQPYFQDYSNAVVNIAENANGTYTLYEPSYMNVSLDFVLSFSFVKTRDSSLGPLLNAMEISRYVEISAKTDSKDLIASRSLRAMLGDDVSTNEGDPCAPTPWEWVTCSSTLPLRIVKIGLSGKSAKGEIPSEINNMDALTELWLDGNSLTGLLPDMSKLVNLRVLHLENNNMKGPLSSYLGNLPDLEELYIQNNSFYGEIPPDLLRKKLIFNYQGNPQLHKGTRSKMNFKLFLGTLAGVLAVLSFLLVLSFLLLRNFRRKKSRQKSICKGDSLRTSTKPSMAYSISRGDEGIAYYITLSELEEATDNYSKKIGKGSFGSVYYGKMKDGKEVAVKIMSDLSIHGNKQFMTEVALLSRIHHRNLVPLIGYCEEEEQSILVYEYMHNGTLRDHLSGSGSRKFMDWLTRLRIAEDAAKGLEYLHTGCNPGIIHRDVKTSNILVDINMRAKVSDFGLSRQAEDDLTHVSSVARGTVGYLDPEYYACQQLTEKSDVYSFGVVLLELISGKKPVSADDYGSDMNIVHWARSLVRKGDVISIVDPFLVGNAKIESIWRIAEVAIQCVEQNGVSRPRMQEIILAIQDATKIERGNEAGGSSNLSSGSSNKAQSSRKTLLTTFLEIESPDLSNDGFLPRAR 930
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 2494171 2498912 + Bma013235.1 Bma15g00250 96372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma15g00250 930 Gene3D Phosphorylase Kinase; domain 1 571 680 - -
Bma15g00250 930 PANTHER - 17 900 - -
Bma15g00250 930 Pfam Protein tyrosine and serine/threonine kinase 608 872 IPR001245 GO:0004672|GO:0006468
Bma15g00250 930 ProSitePatterns Serine/Threonine protein kinases active-site signature. 726 738 IPR008271 GO:0004672|GO:0006468
Bma15g00250 930 SUPERFAMILY Protein kinase-like (PK-like) 587 872 IPR011009 -
Bma15g00250 930 PANTHER OS07G0107800 PROTEIN-RELATED 17 900 - -
Bma15g00250 930 ProSitePatterns Protein kinases ATP-binding region signature. 611 633 IPR017441 GO:0005524
Bma15g00250 930 Gene3D Ribonuclease Inhibitor 372 529 IPR032675 -
Bma15g00250 930 SUPERFAMILY L domain-like 395 505 - -
Bma15g00250 930 SMART serkin_6 605 879 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma15g00250 930 Gene3D Transferase(Phosphotransferase) domain 1 681 893 - -
Bma15g00250 930 Pfam Malectin-like domain 28 360 IPR024788 -
Bma15g00250 930 ProSiteProfiles Protein kinase domain profile. 605 879 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00519 Bma-Chr3:4022371 Bma15g00250 Bma-Chr15:2494171 2.28E-42 dispersed
Bma03g01191 Bma-Chr3:17678338 Bma15g00250 Bma-Chr15:2494171 3.81E-130 dispersed
Bma14g01106 Bma-Chr14:13884990 Bma15g00250 Bma-Chr15:2494171 7.87E-73 dispersed
Bma15g00250 Bma-Chr15:2494171 Bma15g00676 Bma-Chr15:10975454 5.97E-139 dispersed
Bma15g00347 Bma-Chr15:3462264 Bma15g00250 Bma-Chr15:2494171 3.47E-70 dispersed
Bma15g00250 Bma-Chr15:2494171 Bma13g01242 Bma-Chr13:45752494 2.24E-126 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66938 PF12819 Malectin_like 2.50E-86 CL0202 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma15g00250 - - mcha:111019775 1379.39